Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06770 ATGTCTTCAGAAGTAGTGGGTGTGGAGAAGAGCCACCAAAATACAGAACATCACCACGACCATGGCCTCAAGCCTTCATTTCGTAGAAATGATTCTCTCGACATGGAATCCCGCACCTTCACTACTTCTGCTCATGCCTCCAAAGGGCCATCGATGACCATGATTTTGCATCTAGCGTTTCAAAGCATCGGAATTGTGTACGGAGACATAGGAACATCACCTTTGTATGTGTATGCAAGTACCTTCACGGATGGCATCAAGCACAACGATGACATTTTGGGGGTTCTTTCTCTCATCTTATATACTATCACTCTCCTTCCTCTTGTTAAGTACGTGCTCATCGTCTTACGAGCCAATGATAATGGCGATGGAGGGACTTTCGCCTTATACTCTCTGATATGCCGCTATGCCAAAGTGGGGCTTATTCCAAATCAACAAGTTGAAGATGCACAAGTATCTAATTATCAGCTGGAGTTGCCTAAGAATAACCGTATGAAGAGGGCGTCATGGCTTAAGTCTAAGCTTGAGAAAAGCCACTTTGCCAAGCTCTTCCTCTTGCTAGTTACCATGCTTGGCACTTCTATGGTCATTGGGGATGGCATTTTCACTCCTTGCATCTCCGTTTTATCCTCTGTGGGAGGGATCAAGGAAGCTGCTTCTTCAATATCGGATGATCTGGTTGTTGGAGTATCCATAGGCATCCTGATATGCCTTTTCATGGTTCAAAGATTCGGAACTGATACAGTAGGTTACAGTTTTGCTCCCATTCTTTGTGTGTGGTTCACCTTCATCGGAGGCATTGGCTTGTACAATTTCATCAAGTATGATCCAACAGTCATCAAAGCAATAAATCCAAAATACATTGTAGATTATTTTACCAGAAACAAGAAAGATGCTTGGATTTCTCTTGGTGGCGTTGTGTTGTCCATAACAGGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTCAGGTCCATACAAATAAGCATGTGCTCTGTAACATACCCTGCTCTCATACTTGCCTACACAGGACAAGCCTCCTTTCTTCGCAGAAACAACGATCTTGTTTCAGAAACTTTCTATAAGTCCATACCAAATCCTTTGTATTGGCCTATGTTTGTTCTTGCTGTTTTGGCATCAATTATAGCTTCTCAAGCCTTGATTTCAGGGACTTTTTCTATCATCCAACAATCCCTTTCACTTGGATGTTTTCCTCGTGTGAAAATCGTACATACATCAGCCAAGTATGAAGGACAAGTTTACATCCCAGAAATTAATTTCATTCTCATGATAGCATGTGTCGTAGTCACTGCTACATTTAAAAATACAACAAAAATTGGCAATGCTTATGGGATAGCAGTGGTGTTTGTAATGACACTTACATCTGCTTTGGTTGTGCTAATCATGATCATGATATGGAAGACCCACATACTTTTGGTTATCAGCTATGTCCTTATTATCGGTTCTCTTGAGCTTGTCTATTTATGCTCAGTGCTATACAAATTTAAAGAAGGAGGGTATCTTCCTCTTGCCTTTGCTGTGGTGCTAATGACAATCATGTACATTTGGAATGATGTGTATAGAAGAAAGTACTATTATGAATTGGATCATAAGATTTCTCCTGAGAAGCTTAAGGAGATTGCTACTGGCATAGACTTACATAGAATGCCTGGCCTTGCATTGTTCTATTCTGAGCTTGTTCAAGGCATTCCACCCATTTTCAAGCATTATGTGGCAAATGTTCCTGCATTGCACTCTGTTGTTGTCTTTGTTTCCATCAAGTCATTGCCTATTAGCAAAGTTCCCTTGGAAGAGAGGTTTCTTTTTCGTGGAGTGGAACATGGAGAACTCAATGTGTTCCGATGTGTTGTTAGATATGGATATACTGATGTACGCAATGAACAAGAGCCCTTTGAGAGTTTGCTGGTTAGAAGGCTGAAGGCATTTATTGCTGATGGAATTTTGGCATCACAGAGAGTGCTACAGGATGATGATAAAGCTGAGGAAACAATGAATGGTGATGAGGTTGATGGGGTACAAGAGGGTGGTAGTAATGAAGAGAGGCTGAAGCAAGAGGCCATTGGTAAAGAGATGGAAGCATTTGAAAAAGCATTGGGAGCTGGCATTGTTCATTTGATTGGTGAAAGTGAGGTGATTGCTGGCAGAGGAGCTGGTATAGTGAAAAGGGTATTGATAGATTATGGTTACAATTTCCTGAAGAAGAACCTGAGACAGAGTGACAAAGTGTTTGACATTCCTCATAAGCGTATGGTCAAAGTGGGAATGACTTATGAACTTTAA 2307 0.4122 MSSEVVGVEKSHQNTEHHHDHGLKPSFRRNDSLDMESRTFTTSAHASKGPSMTMILHLAFQSIGIVYGDIGTSPLYVYASTFTDGIKHNDDILGVLSLILYTITLLPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPNQQVEDAQVSNYQLELPKNNRMKRASWLKSKLEKSHFAKLFLLLVTMLGTSMVIGDGIFTPCISVLSSVGGIKEAASSISDDLVVGVSIGILICLFMVQRFGTDTVGYSFAPILCVWFTFIGGIGLYNFIKYDPTVIKAINPKYIVDYFTRNKKDAWISLGGVVLSITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRRNNDLVSETFYKSIPNPLYWPMFVLAVLASIIASQALISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEINFILMIACVVVTATFKNTTKIGNAYGIAVVFVMTLTSALVVLIMIMIWKTHILLVISYVLIIGSLELVYLCSVLYKFKEGGYLPLAFAVVLMTIMYIWNDVYRRKYYYELDHKISPEKLKEIATGIDLHRMPGLALFYSELVQGIPPIFKHYVANVPALHSVVVFVSIKSLPISKVPLEERFLFRGVEHGELNVFRCVVRYGYTDVRNEQEPFESLLVRRLKAFIADGILASQRVLQDDDKAEETMNGDEVDGVQEGGSNEERLKQEAIGKEMEAFEKALGAGIVHLIGESEVIAGRGAGIVKRVLIDYGYNFLKKNLRQSDKVFDIPHKRMVKVGMTYEL. 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06770 768 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g06770 768 MobiDBLite consensus disorder prediction 10 30 - -
Seca8g06770 768 Pfam K+ potassium transporter 59 632 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g06770 768 NCBIfam potassium uptake protein 58 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g06770 768 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06770 Seca-Chr8 162529138 162533740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06770 29 768 Inorganic Solute Cotransporters AT4G13420 54.809 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06770 K03549 - qsu:112006945 1128.24