Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06766 ATGTATTTTTTCACCCTTAAGTGGTTGTGCATAACAGAATCCAGAGCCATCACTGCATATGTAGCTGAGAAGTTCAAGGAAACAGGACCTGATCTGATTAGGCACAATGATGCAAAAGAAGCTGCATTGGTGAAGATGTGGACAGAGGTAGAGTCACACTATTATGAGCCAGCAGTGTCACCCATTATCTATGAATACTTTGTGGCTCCTTTTCAAGGCCAAGAACCCAACAAGTCAGTGATTGACACTAATGTGGAGAAGCTGAAGAATGTGTTAGATGTGTATGAGGAGAAGCTGAGCAGCACCGAGTACCTTGCTGGGGACTTTTATAGCCTTGCAGATCTTAGCCATATCTCTGAAACTCACTATTTTATGCAGACTCCATGTGCTTCAATGATCAATGATCGTCCCCATGTTAAGGCTTGGTGGGAGGATATATCTTCCAGGCCTGCTTTCAAGAAAGTTGAGGGAGGAATGACTTTTGCTTGTATGCGAGTCACTGCTACCCTCTATGAGAAACAGATTGAATTTGAGTTTGTTCCCATTGACATGAGAAATGGTGAACACAAAAAGGAACCCTTCCTTTCCCTTAATCCATTTGGTCAAGTTCCAGGGTTTGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACGAAATATATTGCTCATGAGTATGCTGATAAGGGGACAGAGCTGATAAGCAGGGACTCCAAGAAGATGGCGATAACAAGTGTGTGGTTGGAAGTGGAGAGCCAACAATTCGATCAACCAGCTTCAAAACTTTTGTGGGAGTTAGTGTTTAAGCCTATGTTTGGGATTCCCACAGATCCTGCAGCTGTGGAAGAGAATGAAGCCAAACTGAGTACTGTTCTTAGTATCTATGAGAAAAGATTGTCTGAGTCCAAATACTTGGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCTGCTATTAATTTCTTGATGAACTCACCAGTCAAGAAGCTGATTGAATCAAGACCCCATGTTAGTGCATGGGTTGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTCCTTGCCATGCTACCTAAGCAGTAA 1092 0.4313 MYFFTLKWLCITESRAITAYVAEKFKETGPDLIRHNDAKEAALVKMWTEVESHYYEPAVSPIIYEYFVAPFQGQEPNKSVIDTNVEKLKNVLDVYEEKLSSTEYLAGDFYSLADLSHISETHYFMQTPCASMINDRPHVKAWWEDISSRPAFKKVEGGMTFACMRVTATLYEKQIEFEFVPIDMRNGEHKKEPFLSLNPFGQVPGFEDGDLKLFESRAITKYIAHEYADKGTELISRDSKKMAITSVWLEVESQQFDQPASKLLWELVFKPMFGIPTDPAAVEENEAKLSTVLSIYEKRLSESKYLAGECFTLADLHHLPAINFLMNSPVKKLIESRPHVSAWVADITARPAWSKVLAMLPKQ. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06766 363 Gene3D Glutaredoxin 157 235 - -
Seca8g06766 363 PANTHER GLUTATHIONE S-TRANSFERASE RHO 159 359 - -
Seca8g06766 363 Pfam Glutathione S-transferase, N-terminal domain 159 224 IPR004045 -
Seca8g06766 363 CDD GST_C_Phi 240 357 IPR034347 -
Seca8g06766 363 SUPERFAMILY Thioredoxin-like 160 231 IPR036249 -
Seca8g06766 363 Gene3D - 238 362 - -
Seca8g06766 363 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 37 179 IPR010987 -
Seca8g06766 363 SFLD Main (cytGST) 163 350 - -
Seca8g06766 363 SUPERFAMILY GST C-terminal domain-like 20 157 IPR036282 -
Seca8g06766 363 SUPERFAMILY GST C-terminal domain-like 233 356 IPR036282 -
Seca8g06766 363 Pfam Glutathione S-transferase, C-terminal domain 260 351 IPR004046 -
Seca8g06766 363 Pfam Glutathione S-transferase, C-terminal domain 64 150 IPR004046 -
Seca8g06766 363 CDD GST_C_Phi 39 155 IPR034347 -
Seca8g06766 363 FunFam Glutathione S-transferase F2 35 156 - -
Seca8g06766 363 FunFam Glutathione S-transferase F2 236 357 - -
Seca8g06766 363 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 238 363 IPR010987 -
Seca8g06766 363 FunFam Glutathione S-transferase F2 153 235 - -
Seca8g06766 363 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 150 231 IPR004045 -
Seca8g06766 363 SFLD Glutathione Transferase (cytosolic) 11 149 IPR040079 -
Seca8g06766 363 SFLD Glutathione Transferase (cytosolic) 163 350 IPR040079 -
Seca8g06766 363 Gene3D - 34 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06766 Seca-Chr8 162475670 162484784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06766 159 359 Glutathione S-transferase Gene Family AT2G47730 61.881 9.85e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06766 K00799 - gmx:100799868 327.02