Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06745 ATGATCAGAATATCACACCTTACATTACTGCTTCCACTTATCTTTCTTTCATTCATAGTAAACACTGGCCAATTGGTGTTTGCAAAAGGGAAAGACAATGTTAGAGATGCTTGCAGAGTAACTAGGTACCCTGACCTTTGTATGCGCTCACTAGCGCCATTCTCTAACAGTGCTGGAACAAGTCCCAGCAAGTGGGCAAGGGCAGGAGTGACAGTGACAATTGGTGAGGTTAAGAATGTTCAAGCATATCTGGCAAACTTGAAGAGACATGGGCATGTAAAAGGAAGAAACAGAGTTGCACTTTCAGATTGTGTTGAGACTTTTGCAGATGCCCTTGATGAGCTTCACAGGTCACTTGGTGTGCTCAGAAGGCTAAGCAGAAGCACCTTTGGTACCCAGATGGGGGACCTAAATACATGGATAAGTGCAGCACTCACAGATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAAGGGAAGGAAAATCAAATTGCTGCAAAATCGGGTTCTGAAAGCTTATTATATAACCAGTAATGCTCTAGCTCTAGTCAACAAACTTGCCACTACAGGTCTAGGAAGCATATCTGATCCATAG 597 0.4322 MIRISHLTLLLPLIFLSFIVNTGQLVFAKGKDNVRDACRVTRYPDLCMRSLAPFSNSAGTSPSKWARAGVTVTIGEVKNVQAYLANLKRHGHVKGRNRVALSDCVETFADALDELHRSLGVLRRLSRSTFGTQMGDLNTWISAALTDEDTCLDGFQGKKGRKIKLLQNRVLKAYYITSNALALVNKLATTGLGSISDP. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06745 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
Seca8g06745 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 183 - -
Seca8g06745 198 CDD PMEI-like_3 37 189 - -
Seca8g06745 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Seca8g06745 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Seca8g06745 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 189 IPR035513 -
Seca8g06745 198 NCBIfam pectinesterase inhibitor domain 6 187 IPR006501 GO:0004857
Seca8g06745 198 FunFam Pectinesterase inhibitor 3 29 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06745 Seca-Chr8 162184442 162185038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06745 34 196 Carbohydrate Esterase AT3G14310 33.333 6.66e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06745 - - gmx:100791264 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06745 8 162184442 162185038 Seca8g06745 8 162184442 162185038 ECH