Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06740 ATGGTTGCCACTTCCAATATACTGGGGCATGAGGAATGTCAAAGCTACTTAATTTTTCGTGTAGAAACTGCTCTTGCGGCAAGTTTTCGGACAGTTTTGTATTTTCTTGGTCTTGCCTATTGTTTCCTTGGATTATCGGCTATAACAGCTCGCTTCTTCCGATCTATGGAAAACGTGGTCAAGCACACAAGGGAGGTAGTGGAGGTAGATCCTGTTACTAAAACAGAAATTATTAGACATGAAAAAGTTTGGAATTATACAATTGCGGATATTAGCCTGTTGGCCTTTGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTATACAAAATGTGGGGAAACTGTATGCTGGAGGTTTGGGACCTGGAACACTTGTTGGTTCTGCAGCATTTGACCTTTTCCCCATCCATGCTGTATGTGTAATAGTTCCAAAAGCAGGAGAACTGAAAAAGATTGCTGATCTAGGAGTATGGCTGGTGGAGTTGTTTTGGTCATTCTGGGCTTACATTTGGTTATACATAATTTTGGAGGTGTGGACTCCAAATGTGGTGACTCTATGGGAGGCCTTGTTGACAGTGCTGCAGTATGGATTACTGTTAACTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCCCTACCTATTGCAAGAGATGAGAGGCCAGAAGATTGGGTGCCAGAAGAGACTTCTTGTTCTAAACAAAAGTCCCATGAGAAGATGGAGTGCTCCGAGATAATTCATGTTAATGAAGAAAATGGGGACCCTATTGATATTTTTTCCATTCATTCACAAAACCCCACAGATGGATTGTACGTAAGAGTACCTCAAATAGATGATGCAGAAAATTCTGACAAAGCTATGGAAACAATGTTGGAGGATGCCAATTTGCTTACAATTTGGGGGCAGCAGTTTGTGGATGCACTGAGGTTGGAGAGCCAAGAATCTAAAAAAATGAACAATATCTATCGTCGCATAGCTCAAATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTTCTGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACGTTGTTACTAAGATCACAGATCTTATAAGTTGTGTCACAGGTTTTCTTTCTCACATGTTCCAGTCCACTTCTTTACAGTTCCTTATAGATCGAAAGTTGCCTTGTTAG 1224 0.4093 MVATSNILGHEECQSYLIFRVETALAASFRTVLYFLGLAYCFLGLSAITARFFRSMENVVKHTREVVEVDPVTKTEIIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIQNVGKLYAGGLGPGTLVGSAAFDLFPIHAVCVIVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETSCSKQKSHEKMECSEIIHVNEENGDPIDIFSIHSQNPTDGLYVRVPQIDDAENSDKAMETMLEDANLLTIWGQQFVDALRLESQESKKMNNIYRRIAQIFWQLLLLPWRFLFAFVPPCHIAHGWISFICSLLFISGIAYVVTKITDLISCVTGFLSHMFQSTSLQFLIDRKLPC. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06740 407 Gene3D - 86 221 IPR044880 -
Seca8g06740 407 PANTHER SODIUM/CALCIUM EXCHANGER 286 386 - -
Seca8g06740 407 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06740 Seca-Chr8 162106272 162112445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06740 4 397 Antiporters AT2G47600 65.075 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06740 K03452 - gmx:100792839 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06740 8 162106272 162112445 Seca8g06740 8 162106272 162112445 ECH