Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06710 ATGAAGGGGTCTGTTCCCATAAATGATTATGAACAAATAGAAAAATCCACAAATAATTTTGAGGAAGGTAACATCTTGGGTGAGGGTGGTTTTGGACGTGTTTACAAGGCTCGATTGGATGATAACTTGGATGTTGTCGTCAAGAAACTATGCTGTGAAAGTCAAAATGCTACCAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAGCATCCAAATATAATTTCTTTACTGGGTTGTAGCATTGATGACAACACAAAGTTTATTGTGTATGACTTGATGCAAAATGGGTCCTTGGAAGCTCAGTTACATGGTAAAATATTGTTTCTGAGTTCTGATACTGGACTTACATAG 360 0.3611 MKGSVPINDYEQIEKSTNNFEEGNILGEGGFGRVYKARLDDNLDVVVKKLCCESQNATREFENEVDLLSKIQHPNIISLLGCSIDDNTKFIVYDLMQNGSLEAQLHGKILFLSSDTGLT. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06710 119 Pfam Protein tyrosine and serine/threonine kinase 23 107 IPR001245 GO:0004672|GO:0006468
Seca8g06710 119 SUPERFAMILY Protein kinase-like (PK-like) 6 109 IPR011009 -
Seca8g06710 119 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 108 - -
Seca8g06710 119 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Seca8g06710 119 FunFam Protein kinase superfamily protein 1 95 - -
Seca8g06710 119 Gene3D Phosphorylase Kinase; domain 1 2 95 - -
Seca8g06710 119 ProSiteProfiles Protein kinase domain profile. 20 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06710 Seca-Chr8 161828718 161829163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06710 2 119 Receptor kinase-like Gene Family AT1G80640 47.899 4.84e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Seca8g06710 PK_Tyr_Ser-Thr 2.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06710 - - lja:Lj1g3v1841230.1 181.415