Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06661 ATGGTGTCCAAACCTACCGACTCTGCTCTCAAACCTCTTCCAAAACAACATGGAGAGCCAGCAACCGATGCTGCCGGAACCTTGTCCGTCAAGATAAATCAGTTGAAAAAGCAAATACAGGCGGAGAGAATTGTATCCATTAAAGAAAAACTTCAGAGGAATGAGAAGAAACTACAATGTCATATTTCAGAAGTCATGTCAGCAATATCATCCAGGGACTCTTCACAGACGGAGGAAAATAGGAAAAGCTCAATTCTCTCATCCAGAATTGACCATCCTTTGTGTAAATTCAATGGTTTCTCTCAAGTTTCAGGAGACAGAGACCACAACAATCAAGATGAATTATCTGCTACAAGCATCAAAATTCCATATATGGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCACTAATATGTAGTGACAGTGAGGAAGAGATAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTATTCTATGGATGGCATTTGAGGAACATGGTTTAAATGAGGAGGTATTGAATATTGTTAGCAAGTCCGTTGGAGGTACCAATTTAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAATAATATTGGTAGGTTCGACCAACATTCAGAAGGATCAGGAGAATATGAATCTCCTGTTGGCATATGTCCAGAGAAAAGCCTTAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATCTATCCTCGTGAAAAACAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGAAAAATGTGTAAACACTGATTGCCATTCAATTTCCCAGCAGTTAAAGGCTGTCAAAAGTTTGACAGAAGATTCAACTCCAGGGTCTTATCAGGATAAGAAAACTACAATTATAGAAGAGGCAGATGGGATATTGGCACCATCCAGTGCAGAGGAACCTGATAATCAGAGTACCGCACTTCCAACAGAAGTTGATTGTCATGGATATCTCAATTTAAATGCTCCTGTCTCAGAAAATTTGGGGAAACGAAAGGTCACAGATCAATCAGACACAGAACTATGTGACTCCATATTGCCTCCTGATGATCCTCAGAATTCTTGTAAAAAGCTGAAGAGAGTCTCAGATGATGTAGGTACTGTAATTAGTGATTATAACAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACATATAATTACTTGTGCAATTTTGGAAAAATCTGTTGAACACGCTTCAAATAAATTAATAGTTTCTTCAAGCACTTGCCATGGTGAGCATGACAAAAGTGTTGGGGATGGACCACAAGATGTCACAAATGAGACAGAAATTAAAAAGTTGTCCAATTCAATGGAAGGGCAAGTTGATGCGATGCTAAGTCTCTCGGATTGGAAACCTCTGGAGAAAGAGTTATACTTGAAGGGAGTTGAAATGTTTGGCAGAAACAGTTGCCTCATCGCAAGAAACTTACTTTCTGGTTTGAAGACTTGCGTGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCGATGCCCCACAGATCTCTTGTTGCTCCTAGTTCAATCATGGACGACAGGGGAAAATTTGATGGAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCTTCAATATGGAAAAGAATTGCTGATGGTAAAAACCAATCTTGCAAGCAGTATACACCATGCGGATGTCAGTCAATGTGTGGAAAGGATTGTTCTTGTGTTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGTTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGGCGTGGAGAAGGCCAATGCGGCAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGACTACCTTGGAGAGTACACAGGGGAACTAATCTCCCACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCCAATTCATCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTACCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAATCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCCAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTACGGTCCAGATCAAGCACCCCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGACGAATCAGCAGTTCCTCAAGGCAGAGCAAAGAAACACCAATCTCATTGA 2649 0.4186 MVSKPTDSALKPLPKQHGEPATDAAGTLSVKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISEVMSAISSRDSSQTEENRKSSILSSRIDHPLCKFNGFSQVSGDRDHNNQDELSATSIKIPYMERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEEITEPEEEKHEFSEAEDRILWMAFEEHGLNEEVLNIVSKSVGGTNLEIQERYKSIKENNIGRFDQHSEGSGEYESPVGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPREKQTVWSEPEGDRKPCSDQCYLQEKCVNTDCHSISQQLKAVKSLTEDSTPGSYQDKKTTIIEEADGILAPSSAEEPDNQSTALPTEVDCHGYLNLNAPVSENLGKRKVTDQSDTELCDSILPPDDPQNSCKKLKRVSDDVGTVISDYNKNLNLGACDESKHIITCAILEKSVEHASNKLIVSSSTCHGEHDKSVGDGPQDVTNETEIKKLSNSMEGQVDAMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCVEIASYMHAGGVSMPHRSLVAPSSIMDDRGKFDGECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH. 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06661 882 SUPERFAMILY SET domain 604 852 IPR046341 -
Seca8g06661 882 Pfam CXC domain 672 703 IPR041355 -
Seca8g06661 882 ProSiteProfiles CXC domain profile. 620 719 IPR026489 -
Seca8g06661 882 SMART set_7 733 854 IPR001214 GO:0005515
Seca8g06661 882 Pfam SET domain 744 847 IPR001214 GO:0005515
Seca8g06661 882 FunFam Putative histone-lysine N-methyltransferase EZH2 634 850 - -
Seca8g06661 882 SMART CXC_2 668 705 IPR033467 -
Seca8g06661 882 MobiDBLite consensus disorder prediction 853 882 - -
Seca8g06661 882 ProSiteProfiles SET domain profile. 733 848 IPR001214 GO:0005515
Seca8g06661 882 CDD SET_EZH 733 849 - -
Seca8g06661 882 MobiDBLite consensus disorder prediction 1 25 - -
Seca8g06661 882 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 15 882 IPR025778 GO:0031519
Seca8g06661 882 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 881 IPR045318 GO:0006338|GO:0042054
Seca8g06661 882 Gene3D SET domain 634 850 IPR046341 -
Seca8g06661 882 MobiDBLite consensus disorder prediction 859 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06661 Seca-Chr8 161191192 161201482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06661 722 851 C2H2 Transcription Factor Family AT2G23740 26.531 4.34e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca8g06661 SET 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06661 - - gmx:100808730 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06661 8 161191192 161201482 Seca8g06661 8 161191192 161201482 ECH
Seca8g06661 8 161191192 161201482 Seca2g05119 2 137653018 137659639 PCT