Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06660 ATGGAGTTACTGGGAGGGATCAATCCTCTTCCTACTACTACTGAACACGAGAACGAAACCCATTTCTTCAAAGACCAAAACCACCACCAGCAACATGATTTCAACTTTGATAACTTGATTCTAGAAGACTTCAACTTCGAACCTACTCTGGAACCAACACATGGGTTTCAAGAAACAAGAGGGATAAAGAATCAAGAAGTGGCAAGTCCACAACTTGTTAGATACAAGAAGCAAGCTCCACCATCTTCTTTAGCATCACTAGAGCTTCTGAAGAATTATGGAAGCAGGTTCAAGTGGCTAAAGGGTAAAAACCTAAGAAAAATTGAAACTTGTGCGAGTCCCCAGAACCAGAAGCTGTCAACTGAAGACATAATAAGAGTGGCAGGAGCAAGGTATATCCAACACTCAACACAATGGCATGATAATCTTTGCATCCCTATGCATCCATATGGAACTGGTCTTGTGGGTTTGTCTGAGGAAGAAAATAGAGATGTTGAACTTGCTCAGTTTCTTCTTGCAGCCGCAGAGAGGGTAGGGTGTCAACAATTTGAACGTGCAAGCATGTTACTTTACCATTGTCAATTGAATTCACCAGATGGTGGAAGCCCCGTTCAGCGTGTTGTCTTTCATTTCGCTCAAGCACTTAGAGAAAGAATCAACAAAGAAATAGGAGGAAGGGTGGCATTGAAGGGAAGTGAGAAAAATGAAGAAAGGGAATTGATTGAGAATTTGTTATTGGATACTAACATAGCCATTATATGTCACCAAAAAATTCCTTTCAATCAGGTGATGCAGTTTGCTGGTGTACAAGCTATAGTGGAACATGTTGCATCCCAAACCAAAATCCATCTGATAGATCTTGATATTGGACATGGGGTGTTGTGCACATGTTTCATGCAAGCATTGGCAGAGCGCAAGGAAAGGCCAGTTGAGCTTCTGAAGATCACTGCCATTGGAATTGTAGGCAAGATCAACCTAGAAGAGACAGGAAAAAGGTTAATGAGTTTTGCTAAATCCTTGAACTTGCCCCTTTTATATAAATCAGTTTATATTACAGACATGATAGAGATCAAGGTAGAACAATTTGAAATTGAAGATGATGAAGCTGTGGCTATCTATTCTCCTTATTTACTAAGGACTATGATATCAAATTCTGATTGCTTGGAGAACTTGATGAAGGTGATAAGGAAAATCAAACCATCTATAATGATAGTTCTTGAATTGGAAGCGAACCATAATTGTCCCTCCTTTGTGAATCGCTTTGTTGAAGCATTGTTCTTCTTTTCCGCATATTTTGACTGCATTGAGACCTGCATAAAACAGGATTATGAGTGCAGAATGAGAATAGAAGGGATATTATCTGAAGGGATAAGAAACATTGTTGCTATGGAAGATAGAGAAAGGACTGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAACTGGATTTAGCAAGTCATCTCTGTATCAAGCTAACTTGGTTGCCAAGAAATTTAGTTGTGGGAATTTCTGTACTATAGATAAAAATGGGAAATGTCTAATAGTTGGATGGAAGGGAACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1623 0.3925 MELLGGINPLPTTTEHENETHFFKDQNHHQQHDFNFDNLILEDFNFEPTLEPTHGFQETRGIKNQEVASPQLVRYKKQAPPSSLASLELLKNYGSRFKWLKGKNLRKIETCASPQNQKLSTEDIIRVAGARYIQHSTQWHDNLCIPMHPYGTGLVGLSEEENRDVELAQFLLAAAERVGCQQFERASMLLYHCQLNSPDGGSPVQRVVFHFAQALRERINKEIGGRVALKGSEKNEERELIENLLLDTNIAIICHQKIPFNQVMQFAGVQAIVEHVASQTKIHLIDLDIGHGVLCTCFMQALAERKERPVELLKITAIGIVGKINLEETGKRLMSFAKSLNLPLLYKSVYITDMIEIKVEQFEIEDDEAVAIYSPYLLRTMISNSDCLENLMKVIRKIKPSIMIVLELEANHNCPSFVNRFVEALFFFSAYFDCIETCIKQDYECRMRIEGILSEGIRNIVAMEDRERTVRNVKIDVWRRFFARYRMVETGFSKSSLYQANLVAKKFSCGNFCTIDKNGKCLIVGWKGTPIHSISAWKFL. 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06660 540 Pfam GRAS domain family 168 538 IPR005202 -
Seca8g06660 540 ProSiteProfiles GRAS family profile. 158 538 IPR005202 -
Seca8g06660 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 528 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06660 Seca-Chr8 161186915 161188537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06660 165 539 GRAS Transcription Factor Family AT1G66350 28.571 2.12e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca8g06660 GRAS 7.5e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06660 - - gmx:100791952 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06660 8 161186915 161188537 Seca8g06660 8 161186915 161188537 ECH