Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06655 ATGTCGCAGCTCATGGTTTCTATCTCTTTAATCGGTGGGATGAAAATGGTTCAGTGCATGTTGCTGAAAACGTTGCTTACATTATTATTATTTTGTATGGTGTTTATGGTTGATTGTGGTGCATATGATAAAACACTGGAAGCACCTTCAATTTCTCCAGCTTTGGCAGCTGTTGTTGTTGGTGATCTGCCACTACCACGAAATTTTCACGGGTGGAAGCATTTGCCTTCTCGTGCTGCACCAATTCCCTCACATTTATCTATACCATTCACCAATAGGAGGAGTGAATTAGAATCTCCAGTTTCTGGGTTTAAAACTATTGCCCCCATGCATTCTATTGCTGATGCCATTCCTTCTGCTCTGGCTAACCCACCATTGTCCCCTTATGTTTCCAATTGTTGTACACAAGAAAACATGGTGTTGAAACGAGGCAGTGAGAGTTGCCACTGTGTTTATCCCATAAAACTAGATCTTCTTCTTTTGAATGTCTCTCTTTCTCAAAACCCCAATTGGAGTGTTTTTCTTGATGAATTGGCTACCCAACTTGGGCTGCAGACTACCCAAATTGAGCTGATAAACTTTTATGTACTCGGCTTATCAACACTGAATATATCGATGGATATCACTCCACATAAAGGGATCAGTTTCTCTGCTGATGAAGCATCTAAAATAAACTCTTCGCTTTTACTGCATAAGGTTCAACTAGACCGTAGATTTGTCGGTGACTACAAAGTTCTCAATATTACCTGGTTTAAACCTCCACCTCCTTCTCAAGCTCCTACATTTGCCGCATCACCTACAAAATCTCCTCAGAGACAAGCACCAACAACTACATCACCGAGTACTTCGGATAGGGGAAGGCATCCAAATTTGCTTCTTATTCTTGGAATTGTTACTGGAATACTCTTCATTTCCATTGTCTGTGTAGTTATACTTTGTTTATGCATGTTGCGGCCAAAAACAAAAACACCTCCCACAGAAACTGGCCTGCTACTAACATTCGCTCCCTTTCCTACAGAAAAGCCAAGTACGGAAAGTGCAGTTCCAGCTGTTGGGTCTCTTCCCCACCCAACTAGTACACGATTTATTGCTTATGAGGAACTTAAAGATGCAACAAACAATTTTGAACCAGCAAGTGTACTTGGAGAAGGAGGTTTTGGTAGGGTTTTTAAAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGGCTTACTAGTGGAGGGCAACAAGGTGACAAAGAATTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATATTATAGCAATCGTGACTCATCTCAAAATCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATTAATTGCCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCAGACTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCCAATTACTTGTCTACTCGTGTCATGGGCACATTTGGGTTAGCAAGGCCAATTCTTAGAGATAAGGACCGGCTGGAAGAACTTGCTGATCTAAAGCTCGGAGGAAGGTACCCAAAGGAAGATTTTGTCCGTGTTTGCACTATTGCTGCAGCCTGTGTTGCCCCTGAAGCAAGCCAGCGGCCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATTACAGAACATCATGATCCCACGTTATCCTCATCCAATACACGTCCCAACATGAGACAATCCTCTACCACTTATGAGTCTGATGGAACATCTTCAATGTTTTCTTCTGGTCCTTACTCTGGTCTAAGTGCCTTTGATTATGACAACCTGTCTAGGACGGCAGTTTTTTCTGAAGATCTTCATGAAGGACGATAG 2016 0.4266 MSQLMVSISLIGGMKMVQCMLLKTLLTLLLFCMVFMVDCGAYDKTLEAPSISPALAAVVVGDLPLPRNFHGWKHLPSRAAPIPSHLSIPFTNRRSELESPVSGFKTIAPMHSIADAIPSALANPPLSPYVSNCCTQENMVLKRGSESCHCVYPIKLDLLLLNVSLSQNPNWSVFLDELATQLGLQTTQIELINFYVLGLSTLNISMDITPHKGISFSADEASKINSSLLLHKVQLDRRFVGDYKVLNITWFKPPPPSQAPTFAASPTKSPQRQAPTTTSPSTSDRGRHPNLLLILGIVTGILFISIVCVVILCLCMLRPKTKTPPTETGLLLTFAPFPTEKPSTESAVPAVGSLPHPTSTRFIAYEELKDATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGLARPILRDKDRLEELADLKLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEHHDPTLSSSNTRPNMRQSSTTYESDGTSSMFSSGPYSGLSAFDYDNLSRTAVFSEDLHEGR. 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06655 671 Gene3D Phosphorylase Kinase; domain 1 357 452 - -
Seca8g06655 671 FunFam Receptor-like serine/threonine-protein kinase ALE2 355 452 - -
Seca8g06655 671 MobiDBLite consensus disorder prediction 262 285 - -
Seca8g06655 671 MobiDBLite consensus disorder prediction 611 641 - -
Seca8g06655 671 PANTHER OS01G0750732 PROTEIN 547 620 - -
Seca8g06655 671 Gene3D Transferase(Phosphotransferase) domain 1 550 626 - -
Seca8g06655 671 Gene3D Transferase(Phosphotransferase) domain 1 453 549 - -
Seca8g06655 671 Pfam Protein kinase domain 378 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06655 671 MobiDBLite consensus disorder prediction 257 285 - -
Seca8g06655 671 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Seca8g06655 671 FunFam Protein kinase superfamily protein 453 527 - -
Seca8g06655 671 ProSiteProfiles Protein kinase domain profile. 375 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06655 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Seca8g06655 671 SUPERFAMILY Protein kinase-like (PK-like) 361 635 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06655 Seca-Chr8 161143022 161152114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06655 20 671 Receptor kinase-like Gene Family AT4G02010 59.116 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca8g06655 Pkinase 2.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06655 - - gmx:100792818 1010.75