Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06641 ATGAAGAAAATTGATGTTTTTAAAGGAATATTGGATAATTATGTCTTCGTGTGTGTCATCAGTGCTATTGTTTTCTTTCAAATCGTAATAGTTGAGTACTTGGGAACCTTTGCAAACACGACACCTCTCACTCTGGTTCAGTGGTTCTTTTCCTTATTCGTTTGA 165 0.3515 MKKIDVFKGILDNYVFVCVISAIVFFQIVIVEYLGTFANTTPLTLVQWFFSLFV. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06641 54 Gene3D - 2 54 - -
Seca8g06641 54 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 53 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06641 Seca-Chr8 161025887 161026051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06641 1 54 Primary Pumps ATPases AT2G22950 79.630 9.98e-25 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06641 K01537 - gmx:100792691 94.7449