Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06624 ATGGGTGGTAAAGCCACTGTGAGCGTCGCGAAGGCATACCCATCAGATCGGTCTGGTGGTTCGTCTTTGTCAGGATCCGCTTTCTCCTCGTCATCGATGATTGGTGGCTATGGTGGAGCCGTTGCATGGCGAGAAGAGCAAGATGACGGCCATCCGAGTTTCATCTCCACTCTTATTGGTGCCTTATTCCATCTTGTGGAGCCAGCAGGTGGAAAAATCATAGTTGATGGCATTGACATTTGCTCCATTGGACTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGATCCTACTCTCTTTAATGGGACAGTAAGATACAATTTGGACCCATTATCTCAACACAATGATCAAGAGATATGGGAGCAAATGTGGACTAATTGTAGGTTCCACATGAAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTTCAAGAGAAAGAAGGGGGCTTAGACTCCTCAGTGCATAGGATATCTGGTGCACATATCATGTGCACTTACACAGTTACAAGACATGCCAAAGTAGCTTGGAACACAATCATGCACTAA 552 0.4583 MGGKATVSVAKAYPSDRSGGSSLSGSAFSSSSMIGGYGGAVAWREEQDDGHPSFISTLIGALFHLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHNDQEIWEQMWTNCRFHMKVLGKCQLQEAVQEKEGGLDSSVHRISGAHIMCTYTVTRHAKVAWNTIMH. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06624 183 Gene3D - 55 164 IPR027417 -
Seca8g06624 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 127 IPR027417 -
Seca8g06624 183 Pfam ABC transporter 56 124 IPR003439 GO:0005524
Seca8g06624 183 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 56 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06624 Seca-Chr8 160831720 160832995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06624 56 110 Calmodulin-binding Proteins AT2G36910 34.545 4.76e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06624 K05666 - lja:Lj5g3v1961200.1 172.555