Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06608 ATGGGGAGAACTCTATACATGCTCTCTACCTTAGTTCTAATTCTCTCAGTTTCATCACTGGCATCATCAACATCTTTGAAGGTGGATTTCTATAAAACTACATGTCCATCCGCTGAGGCAATAGTTAGAAGAGCTGTAAACAGAGCCGTTTCACTTAACCCAGGCATCGCTGCTGGCTTGATTAGAATGCATTTTCATGACTGTTTTGTGAGGGGGTGTGATGGTTCAGTACTGTTATTAGCAGCATCGACAGCAGCTAAGGCCCAAATAGAGGCTGAGTGTCCTGAAACGGTGTCGTGTGCTGACATTATTGCTTTTGCAGCACGAGACAGCGCTCGCAAAGTTGGAGGCATAAACTACGCTGTACCAGCAGGACGCAGAGACGGTCGAATCTCTATCAGTGAGGAAGTGACACAGAATCTGCCAGGACCAAACTTCACTGCAGAGCAACTTATCAGTAACTTTGCCAGAAAAGGACTGTCAGTAGATGAAATGGTGACACTTTCTGGAGCTCATTCAATTGGTGTATCACATTGTTCCTCCTTCTCTGATCGCTTATACTCTTTCAATTCCATCGTTTCTCAAGATCCCTCTATGAACCCTAAGTTTGCCACTCTTTTGAAATCAAAGTGTCCTCCACGGAGCATTGGTGATAGCACTAACCCAACAGTGTCGCTTGATGCTTCCACGCCTAACCGTTTGGACAATAAGTACTATATGGGGCTCAAGAACCACCGTGGTTTGTTGACCTCAGATCAGACGCTGCTTAGCAGCCACTCAACGAGGCGAATGGTGTTAAGCAATGCTAAACATAGTTCTAGCTGGGCAGTTAAGTTTGCCAACGCAATGGTGCATATGGGTTCCATAGACGTCCTAACTGGCTCACAAGAAACCCTAAAGAGCTCTCTGAAGAAGTTACGAGCGATGATGGGAGGTGGGGCGGAAGTTCCTCAAGCTCGAATGCATAAGAGGAACAACAATGGAAGTTGGAGCACCTCATCTGTATCAATGGGTGGTGCTGTTCGGCTGTGCCATTGTGGTTCGAAGGCTGCTATTAGAACCTAA 1065 0.4629 MGRTLYMLSTLVLILSVSSLASSTSLKVDFYKTTCPSAEAIVRRAVNRAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLLAASTAAKAQIEAECPETVSCADIIAFAARDSARKVGGINYAVPAGRRDGRISISEEVTQNLPGPNFTAEQLISNFARKGLSVDEMVTLSGAHSIGVSHCSSFSDRLYSFNSIVSQDPSMNPKFATLLKSKCPPRSIGDSTNPTVSLDASTPNRLDNKYYMGLKNHRGLLTSDQTLLSSHSTRRMVLSNAKHSSSWAVKFANAMVHMGSIDVLTGSQETLKSSLKKLRAMMGGGAEVPQARMHKRNNNGSWSTSSVSMGGAVRLCHCGSKAAIRT. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06608 354 Gene3D - 85 300 - -
Seca8g06608 354 Gene3D Peroxidase, domain 2 142 286 - -
Seca8g06608 354 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Plant peroxidase signature 163 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 CDD secretory_peroxidase 27 296 IPR033905 GO:0004601|GO:0042744
Seca8g06608 354 PANTHER PEROXIDASE 25-RELATED 15 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 FunFam Peroxidase 142 286 - -
Seca8g06608 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 164 174 IPR019793 -
Seca8g06608 354 PRINTS Haem peroxidase superfamily signature 98 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Haem peroxidase superfamily signature 116 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca8g06608 354 Pfam Peroxidase 42 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 Gene3D - 26 83 - -
Seca8g06608 354 SUPERFAMILY Heme-dependent peroxidases 26 298 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g06608 354 ProSiteProfiles Plant heme peroxidase family profile. 25 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06608 Seca-Chr8 160682053 160684159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06608 26 302 Peroxidase AT1G71695 41.333 2.48e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06608 K00430 - gmx:100815158 410.994