Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06576 ATGACCAATACAATGAAGCTGATTTTGATAGCAGTTGAATTTGCATGCTTAGTTTCTGGGATTATCTCCTCTGGATCTGAGACACTGTCTATGCTTTCTTTCTTAGAAAACGGTGCCGTTTCAGCGATGCCTTTCTCCTCACCCCAACCTCTTATGGTCAACCTCACTCTTATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCCTGGATTTGGATCTGGTGCAAATAGTTGGCTTGTTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCGCCGTGGTTCCTCAAATTACATGGAAAATCAAATACCATTCACAGGAATATTAAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAGTTAAGGTACTGTGATGGAGCATCTTTCAGTGGAGATAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGATTTAATGTCCAAAGGAATGCAGACAGCCGACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTTCAGAGCTTGTTTCCAAATTCTTCCAAAGTGAAATGTTTGAGTGATGGAGGCTTTTTTCTTGATGCAATTGATGTATCTGGGGGGCGCACACTGAGGAATATGTTTGAAGGTGTAGTTCAGTTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTTGACCAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTCAAACATATTGAGACCCCATTGTTTCTACTCAACGCGGCTTATGATGCATGGCAGGTCCAAGCCAGTTTAGCCCCACCATCAGCTGACCCTCTTGGCTCTTGGAATGACTGCAGATCAAACCATGCAACTTGTAACTCATCTCAAATTCAGTTCCTCCAAGCAGACTTCAGAAATCAAATGCTAAATGACGTGAAAAACTTCTCAAAGTCATCTCAAACTGGACTGTTTATAAATTCCTGTTTTGCTCATTGCCAATCTGAGAGACAGGAGACATGGTTCGCTGATGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTTTTTCGAACGAGAAGCTGTCAAAGCTATTGACTGTGCTTACCCTTGTGACAACAGCTGCCATAATCTGGTCTTTAAGTGA 1254 0.4258 MTNTMKLILIAVEFACLVSGIISSGSETLSMLSFLENGAVSAMPFSSPQPLMVNLTLIQGADSKGAVCLDGTLPGYHLDPGFGSGANSWLVHLEGGGWCNTIRNCVYRKNTRRGSSNYMENQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSENESAQLQFRGQKIWLAAMEDLMSKGMQTADQALLSGCSAGGLASIIHCDEFQSLFPNSSKVKCLSDGGFFLDAIDVSGGRTLRNMFEGVVQLQEVQKNLPKSCLDQLDPTSCFFPQNLVKHIETPLFLLNAAYDAWQVQASLAPPSADPLGSWNDCRSNHATCNSSQIQFLQADFRNQMLNDVKNFSKSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWFFEREAVKAIDCAYPCDNSCHNLVFK. 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06576 417 PANTHER NOTUM-RELATED 35 413 IPR004963 GO:0016787
Seca8g06576 417 Pfam Pectinacetylesterase 48 396 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06576 Seca-Chr8 160217070 160222304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06576 45 417 Carbohydrate Esterase AT1G57590 71.850 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06576 K19882 - gmx:100786972 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06576 8 160217070 160222304 Seca2g05188 2 138364512 138368082 PCT