Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06574 ATGGCCCTTGGATCCCGGATTAAGCCTCAAAGGAACAAAAAAGGTGACTCTGCAAAATTGCAAATACAAGTCTTGTTGGAAACTAAGAATCCAAGGTGTCTTCCAACATCACTTGCAAAGGTTTATGAAGACATTGAATTTGAAACAGCAGCTGCTACAAGGATTCAAGTTGCCTTTCGCTCGTATTCCGCAAGGAATGCATTGCATGCTTTAAGGGGATTAGTCAAGATACAGGCACTGGTCAAGGGTCATATTGTAAGGAAACAAACAACTGCCACACTGCGTGGCATGCATGCGTTGATGGCCATACAAGTTAGAGCCCGAATTCAGAGAATTCAGATGGTAGAGGAAGTAAATCTCCTCGGAAAACAGCCTCCGCAACATAGAGAAATTCCACACATGAAAGGTCTCATATCAGAAGAAAATCAAGTAAGCCTCTGCCAAATATTCCCAATGTTAACATCTGAAGATTGGCATAATATGATCATTCAAGTAAAACCATTATATTCCCTCTGTTCCAAAGTCTTGTGCTTGGCTTCAGAACCTACATATGAACCATTAGAACAAGAGAGCATGGAATTGCATTGGATCTCATTAACTGAAACATTTGAAACAGGCTCCAACATATCATTAACTTTTGGTAAATGTTTCATTCCCTCTAAAAACTGA 669 0.4006 MALGSRIKPQRNKKGDSAKLQIQVLLETKNPRCLPTSLAKVYEDIEFETAAATRIQVAFRSYSARNALHALRGLVKIQALVKGHIVRKQTTATLRGMHALMAIQVRARIQRIQMVEEVNLLGKQPPQHREIPHMKGLISEENQVSLCQIFPMLTSEDWHNMIIQVKPLYSLCSKVLCLASEPTYEPLEQESMELHWISLTETFETGSNISLTFGKCFIPSKN. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06574 222 ProSiteProfiles IQ motif profile. 72 99 IPR000048 GO:0005515
Seca8g06574 222 Pfam IQ calmodulin-binding motif 75 89 IPR000048 GO:0005515
Seca8g06574 222 Gene3D - 46 100 - -
Seca8g06574 222 ProSiteProfiles IQ motif profile. 48 76 IPR000048 GO:0005515
Seca8g06574 222 PANTHER IQ-DOMAIN 5-RELATED 35 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06574 Seca-Chr8 160214897 160216063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06574 46 115 IQD Protein Family AT4G14750 61.429 9.28e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06574 - - vra:106774838 187.193