Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06567 ATGGCCTCAAGCTACCCATATGTTGTTGGAGTTCAGGCTATTATGCCATCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTGATTATGTGGGCACTGCTCCTTACCTAAGTTGCACTCCTTCTGTTCTTCATCACCGACTTTCCTCAAGTGATCGGTTCTTGGTACTCTCCTCTGATGGGCTCTACCAATATTTCAGCAATGAAGAAGTTGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCTGATGGTGATCCTGCACAATACCTTATTGCTGAGCTTCTCTTTTGTGCTGCTAAAAAGAATGGTATGGACTTTCATGACTTGCTTGATATTCCTCATGGAGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGCTTTGGAGATCATCAGGATAA 426 0.4272 MASSYPYVVGVQAIMPSFNEALLEVFQVDYVGTAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPDGDPAQYLIAELLFCAAKKNGMDFHDLLDIPHGDRRKYHDDVSVMVVSLEGRLWRSSG. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06567 141 Pfam Protein phosphatase 2C 31 81 IPR001932 -
Seca8g06567 141 Gene3D - 9 138 IPR036457 -
Seca8g06567 141 ProSiteProfiles PPM-type phosphatase domain profile. 1 132 IPR001932 -
Seca8g06567 141 SUPERFAMILY PP2C-like 28 133 IPR036457 -
Seca8g06567 141 PANTHER PROTEIN PHOSPHATASE 2C 24 131 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06567 Seca-Chr8 160156652 160158114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06567 16 141 PP2C-type Phosphatase Gene Family AT2G46920 82.540 6.60e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06567 - - vvi:100262441 243.432