Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06547 ATGGCGAACCTTTTCTGGGTTGCCATTGTTATAGGACTCCTTTTCACCAACTGGGTTGATGCCTTTGCAACTAATCAATATTATCATCCCATCAATGAAACAGAACTGTCTCTGTTAGAGGCTCATGAAGCTTCCTTATACGGGGTTAGTGCGAAACCTCTAATGGTAGGATTCACCTTTATTCAAGGTGCTGCTGCTAAAGGAGCAGTGTGCTTGGATGGAACATTGCCTGGTTATCATTTGCATAGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATAACGTTAGAACATGTGTTTATCGCAAGAAAACAAGGCGTGGATCATCAGCATTCATGGAAAAGGAGATACCTTTTACAGGGATAATGAGCAATAATGCTCGAGAGAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCCTCTTTTACCGGGGATGCTGAAGATAAGGCAGCGCAGCTGCAATTCAGAGGACAACGAATTTGGTGGGCTGCAATGGATGATTTGATGTCAAAGGGAATGCGTTATGCCAAGCAGGCTCTTCTTTCTGGATGCTCTGCTGGCGGTTTGGCTACTATTATACACTGTGATGAATTTCGAGGTCTATTTCCAAGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGATTATTTCTTGATGTCTTGGATGTATCTAGAGGGCATACCATCAGGAATTTTTTCGGTGGTGTTGCATGGCTACAGGGAGTGCAGAAGAATCTACCACGCACTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGGCAGTGTTAGGACCCCGCTATTCATTCTCAATAGTGCCTATGATTCATGGCAGATCATGTCAAGCTTAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATGATTGCAGATTAAACCATGCTAAATGTACTGGTCAACAAATCCAGTTTCTACAAGGATTCAGGAATCACATGCTGAATGTAATTAGAGGCTTCTCAAGATCAAATCAAAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAAGATACATGGTTTGCTGGCAATTCTCCTTCCATTGGGAACAAGGCAATTGCTTTGGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTATCCTTGTGATAATACATGCCACCATCTGGTTTTCAGATGA 1260 0.4317 MANLFWVAIVIGLLFTNWVDAFATNQYYHPINETELSLLEAHEASLYGVSAKPLMVGFTFIQGAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNNVRTCVYRKKTRRGSSAFMEKEIPFTGIMSNNARENPDFFNWNRVKIRYCDGASFTGDAEDKAAQLQFRGQRIWWAAMDDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDVLDVSRGHTIRNFFGGVAWLQGVQKNLPRTCTNHLDPTSCFFPQNLIGSVRTPLFILNSAYDSWQIMSSLAPPSADPHGYWHDCRLNHAKCTGQQIQFLQGFRNHMLNVIRGFSRSNQNGLFINSCFAHCQSERQDTWFAGNSPSIGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06547 419 PANTHER NOTUM-RELATED 52 415 IPR004963 GO:0016787
Seca8g06547 419 Pfam Pectinacetylesterase 51 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06547 Seca-Chr8 159976011 159980837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06547 1 419 Carbohydrate Esterase AT1G57590 65.000 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06547 K19882 - gmx:100793403 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06547 8 159976011 159980837 Seca2g05188 2 138364512 138368082 ECH
Seca8g06547 8 159976011 159980837 Seca8g06547 8 159976011 159980837 ECH
Seca2g05188 2 138364512 138368082 Seca8g06547 8 159976011 159980837 ECH
Seca12g00539 12 4799408 4806135 Seca8g06547 8 159976011 159980837 ECH
Seca8g06547 8 159976011 159980837 Seca2g05207 2 138551786 138556541 PCT