Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06514 ATGGGTGGTAATGTTAATGGGAATTCAGCTACGCCAACGATTGAGATTAAAGATCTGAGATTTACATACCCTGGCATCGACGGCCATCCTCCGCCGGGTTCCACTCCTCTTATTCAAGACTTCTCTCTCTCCCTCCATTCCGGCAACCGTTGCCTTCTCGTTGGATCCAATGGCGCTGGTAAGACAACAATCCTGAAGATATTAGGAGGGAAGCACTTGGTGGAGCCAGAAATGGTTCGTGTGCTCGGAAGATCAGCTTTTCATGACACCACTTTAGCATCTTCTGGTGATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCAGGTTTTGAGGTTCCAATACAAATGGACATTTCTGCAGAAAAAATGATATTTGGTGTAGCTAGGATTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTATTAGATATCAATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAGGTTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACTATTATCTACGCAACACATATATTTGACGGCCTTGAGGATTGGCCCTCACATATTGTTTATGTAGCCCATGGAAAGCTCCAACTCGCCATGCCTATGGATGAAGTCAAGGAAATTAGCAAGCTGTCACTAATGAGAACAGTTGAAAGTTGGCTGAGGAAAGAACGAGATGAAGATAGGAGAAAAAGGAAAGAGAGGAAGGCTGCTGGCCTATCTGAATTTGAAAAGCAAGTTGATGGAAGCCGTGTAACAGGGGACCCAGCACGTGCTGCGGTTCGAGTAACTAACAATGGCTGGGCAGCAGGGCGATTACATTCCACCATTGCTGGTGAGGAGAACTTTCTCCTGAGCTCAAACCGAGTATTGAGATAG 996 0.4518 MGGNVNGNSATPTIEIKDLRFTYPGIDGHPPPGSTPLIQDFSLSLHSGNRCLLVGSNGAGKTTILKILGGKHLVEPEMVRVLGRSAFHDTTLASSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVARIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPSHIVYVAHGKLQLAMPMDEVKEISKLSLMRTVESWLRKERDEDRRKRKERKAAGLSEFEKQVDGSRVTGDPARAAVRVTNNGWAAGRLHSTIAGEENFLLSSNRVLR. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06514 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 250 IPR027417 -
Seca8g06514 331 SMART AAA_5 47 234 IPR003593 GO:0016887
Seca8g06514 331 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
Seca8g06514 331 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 13 260 - -
Seca8g06514 331 Gene3D - 4 286 IPR027417 -
Seca8g06514 331 Pfam ABC transporter 39 184 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06514 Seca-Chr8 159587264 159590223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06514 14 211 Calmodulin-binding Proteins AT2G36910 23.721 1.18e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06514 K12608 - gmx:100782386 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06514 8 159587264 159590223 Seca8g06514 8 159587264 159590223 ECH