Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06492 ATGGTTTGCTCGGAAGAGTTGTTAGTTAAAAAAGTCTGCGATCTCTATGATCAAATCTCAAGTCTAGAGACTCTGAAACCCTCCAAAAATGTCGACATGCTATTCACCAAATTGGTCCTCACATGCATGCCACCTAGCACTATCGATGTTACCAAGCTGACCCCAAGTGTGCAACAGATTCGATCCAACCTTATAAGGCTCTGTGGTGAAGCTGAAGGCCTTTTGGAGAGCCACTACTCAACCATCTTATCTTCCTACCATAACCCACTCCATCATCTCTCTATTTTCCCTTACTATTCCAATTACCTCAAACTTGCTCTCCTTGAATTCACTATCCTTACCAACCACTGCACCCTTCTCCCTACCAAAATTGCTTTTATTGGCTCAGGGCCCCTTCCTCTTACCTCACTTGTCTTGGCCTCCAAACACCTTAAAACCACAACTTTCCACAACTATGACTTGGATCCTTCAGCCAATTCCAAAGCTCTGCGCTTGGTTTCAACTGATCCTGACTTGTCAAAGCGTATGGTGTTTCACACAAGTGATATATTGGATGTGTCAAACGCTTTGAAAGAGTATGAGGTTGTTTACTTGGCAGCCCTTGTGGGGATGAACAAGGAGGAAAAGAATCGAATCATTGATCATTTAGCCAAATACATGGCTCCAGGAGCCTTTTTGATGCTGAGGAGTGCCCATGGGGCTCGGGCTTTCCTGTATCCAGTGGTTGACCCTAACGATCTTCGAGGCTTTGAGGTTCTCTCTGTGTTCCACCCAACGGATGATGTCATCAATTCAGTTATTATAGCACGGAAGAAGTACCCTATGGCTATAGTACCAAATAAGTGTTGTGATGAGAGCCAAGTGTTATTCAACCATGGGAATATGATTGAGGAATTGGCAATTGAGGAGAATTGA 915 0.4404 MVCSEELLVKKVCDLYDQISSLETLKPSKNVDMLFTKLVLTCMPPSTIDVTKLTPSVQQIRSNLIRLCGEAEGLLESHYSTILSSYHNPLHHLSIFPYYSNYLKLALLEFTILTNHCTLLPTKIAFIGSGPLPLTSLVLASKHLKTTTFHNYDLDPSANSKALRLVSTDPDLSKRMVFHTSDILDVSNALKEYEVVYLAALVGMNKEEKNRIIDHLAKYMAPGAFLMLRSAHGARAFLYPVVDPNDLRGFEVLSVFHPTDDVINSVIIARKKYPMAIVPNKCCDESQVLFNHGNMIEELAIEEN. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06492 304 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Seca8g06492 304 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Seca8g06492 304 PANTHER NICOTIANAMINE SYNTHASE 3 5 300 IPR004298 GO:0030410|GO:0030418
Seca8g06492 304 Gene3D Vaccinia Virus protein VP39 4 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06492 Seca-Chr8 159314950 159316349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06492 1 303 Nicotianamine Synthase Gene Family AT1G09240 60.883 3.33e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06492 K05953 - gmx:100794250 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06492 8 159314950 159316349 Seca8g06492 8 159314950 159316349 ECH