Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06487 ATGGGTGGGTTGAGTGAGGTTCTTACACAAATTCTGATACCTGTGGCTGCAGTAATTGGGATTGGGTATGCTTTGCTTCAATGGCTTTTGGTCTCGAGGGTCAGGGTCTCTGCAGCTGCTGATCACACTGATGCAGACAACGGATATAACAAAAGCTTAATTGGAGATTCAGAGTTGGAGAATGGTGTTCAGGGTCTTGATGTTACCATTAAGTGTGCTGAAATCCAGCAAGCTATTTCTGTTGGAGCTACTTCTTTTCTGTTTACCGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGCAATAATTTTCCTCTTTCTGGGCTCTGTGAAGGGCTTTAGTACCAAGAGTGAACCTTGCACTTATAATGAAGGCAATCTTTGTAAACCAGCACTTGCTAATGCCCTCTTTAGCACTGTTGCTTTCTTGCTTGGTGCTCTAACCTCTGTCCTTTCTGGCTTTCTCGGGATGAAGATTGCAACCTATGCCAATGCTAGAACAACTCTTGAAGCAAGGAAAGGAGTAGGAAAGGCATTTGTTACTGCTTTTCGCTCTGGTGCAGTGATGGGCTTTCTGCTTGCTGCAAATGGCCTGTTGGTGCTATACATCTCCATCAATTTATTCAAACTGTATTATGGAGATGACTGGGAGGGACTTTATGAGTCTATTACTGGCTATGGGCTTGGAGGTTCGTCAATGGCACTCTTTGGAAGAGTTGGAGGAGGTATATACACCAAAGCTGCTGATGTTGGTGCTGACCTTGTAGGGAAAGTTGAACACAATATCCCTGAAGATGATCCACGCAACCCAGCTGTTATTGCAGACAATGTAGGAGACAACGTTGGAGATATTGCTGGGATGGGTTCTGACTTATTTGGGTCTTATGCAGAATCATCATGTGCAGCTTTATTTGTTGCATCCATATCATCGTTTGGATTGAATCATGATTACACAGCCATGTCATATCCTCTCATCATAAGCTCAATGGGAATTGTGGTTTGCTTGATAACAACTCTTTTTGCAACTGATATGTTCGAAATAAAAGATGTGAGCCAAATAGAACCAACCCTGAAAAGACAGCTTCTTATCTCCACTATCTTAATGACCGCTGGTATTGCTATAGTGAGCTTCTTTGCTTTGCCATCAGAATTTACTATCTATAATTTCGGGGGCAATAAGGTTGTTAAGAACTGGCACCTTTTCTTCTGTGTTGCAATTGGCTTATGGGCTGGACTTGTAATTGGGTACATTACTGAGTACTACACTAGCAGTGCTTACAGCCCAGTGCAAGATGTGGCAGATTCCTGCAGAACTGGAGCTGCAACAAATGTGATTTTTGGATTGGCACTGGGATATAAATCAGTCATTATTCCAATATTTGCTATTGCTGTTGCTATTTATGTAAGCTTCAGCCTTGCCGCCATGTATGGAATTGCGGTTGCAGCACTTGGAATGCTCAGTACCATTGCCACTAGTCTTGCCATTGATGCTTATGGTCCCATTAGTGATAATGCTGGAGGTATTGCAGAAATGGCTGGAATGAGACATGAGATACGAGAAAGAACAGATGCTTTGGATGCTGCAGGAAACACCACAGCCGCTATAGGCAAGGGTTTTGCTATTGGATCAGCTGCACTCGTGTCTCTTGCATTGTTTGGTGCTTATGTGAGCAGAGCAGGCATCAAAACAGTGAATGTGCTGACCCCAAAAGTTTTTATTGGTTTGATTGTGGGAGCAATGCTTCCCTACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATACTATTCCAGGTCTTATAGAAGGAAGAGCAAAACCAGATTATGCTACTTGTGTAAAGATTTCCACTGACGCCTCACTTAGGGAGATGATCCCACCTGGTGCATTAGTTTTGCTTACACCACTTGTTGCCGGAACATTCTTTGGGGTAGAGACTCTTGCTGGGGTTCTTGCTGGCTCTCTTGTTTCTGGTGTCCAGGTGGCAATTTCAGCTTCAAACACTGGTGGTGCATGGGATAACGCCAAGAAATACATAGAGGCTGGTGCTACCCCTCATGCTGTATCACTGGGTCCAAAAGGCTCAGACGCTCACAAGGCAGCTGTCATAGGTGACACTGTTGGAGACCCTCTCAAGGACACTTCTGGTCCCTCACTCAACATCTTGATCAAGCTGATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCTGCTCACGGAGGCTTAATCTTTAAATTACTCTGA 2295 0.4397 MGGLSEVLTQILIPVAAVIGIGYALLQWLLVSRVRVSAAADHTDADNGYNKSLIGDSELENGVQGLDVTIKCAEIQQAISVGATSFLFTEYRYLTIFMGVFGAIIFLFLGSVKGFSTKSEPCTYNEGNLCKPALANALFSTVAFLLGALTSVLSGFLGMKIATYANARTTLEARKGVGKAFVTAFRSGAVMGFLLAANGLLVLYISINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGLNHDYTAMSYPLIISSMGIVVCLITTLFATDMFEIKDVSQIEPTLKRQLLISTILMTAGIAIVSFFALPSEFTIYNFGGNKVVKNWHLFFCVAIGLWAGLVIGYITEYYTSSAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLIEGRAKPDYATCVKISTDASLREMIPPGALVLLTPLVAGTFFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGATPHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLL. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06487 764 PIRSF H+-PPtase 12 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca8g06487 764 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca8g06487 764 NCBIfam V-type H(+)-translocating pyrophosphatase 8 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca8g06487 764 Pfam Inorganic H+ pyrophosphatase 70 749 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca8g06487 764 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06487 Seca-Chr8 159232892 159237132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06487 4 627 Primary Pumps ATPases AT1G15690 79.841 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06487 K23025 - gmx:100812548 1400.19