Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06471 ATGGTATCATCACATAGGCAATCTCGCGAGGAGCATGGGGGTGATGACAGACGTCATAGAATCCCAATTCAGGAATCTAAACAGAAACACAGTGATCCAAAACAAGCAGCTTTTAGTGGCCTTGGAAATGTGCTAAAAGGGTTGTGGAGCAATGACCTTGAATTATACTTTGAACGTTTCCTGCGAAGAGTGGTGCGGGAAGAGGTGGAACGCAAAATCCCAGATTACCTATGTACAAGAGCAACGGCTAATCAGGCTGGCATATCTAGAACCACACATTTTCAGTTGCGTTTCATTAGTAAATTGGCTGATACAATTTTCACACACACTGACATCATAGCAGAGGATAACACACCCATTCAAATTGCTCTCTTTGATGTTAGATCTCAGTCAATTGTTAATGTTGGCCCCCTCTCATGTATAAAGATAGAGATCTGTCCCCTCAATGGCGAGTTCAGCTTTAATGACAATGAGGATTGGACTGAAGATGATTTCAATGCCAATATCTTGCGTGAGAGGGATGGTAAAAGGCCATTACTGAATGGAGATAGGTTTATTGCTCTGAAAAATGGAGTAGGTTGTATCAATAAACTTGTGTTCACAGATAACTCAAGATGGATAAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTGTGCAACCAATTTCAAGTGAAACAAGCATTAAGGAAGGTAGAAGTGAACCTTTTGTTGTCAAAGATTATAGAGGAGAGTCTTACAAGAAACACTATCCTCCTTCCTTGAATGATGATGTTTGGCGTTTGGAGCAAATTGCCAAAGATGGAAAAATCCACAAGCGGTTGTCTTTCCATGGAATTCACACTGTCCAGGATCTGTTGCGGTTATACACAACAAATCAATCTTTATTATATGAGAAGGTTGGCAACATTCCGAAGAGGTCATGGCTAGCAATTATTGAACATGCCAAGACTTGTGTGATTGATGATGACAAGCCTTATGTCTACCGAACAGCAGAACAACCAATAGGTCTGCTTTTCAATTCCATCTATGTCCTTGTAGGAGTGACATTTGATGGGCAAAATTATTGTTCTCCTGATATTCTCACCCCCAATGAAAAGGTACACAAACATTTGGTGGAAATAGTGAAGCAACATGCTTATAAAAATGTGAATCATTTGAAGCCAATTGATGATACATCATTGAGCTGCTTAAGACCATTGGCATGTCTAGGAGCAGGGCAGTCCAGTGCTACAGATCAAGGTCTTCAACAATTTAATATCTCTACAGTAAATGAAGGTCATCAAGAAACATGGTCAGGTTATGATCAACCATTCACCTCAACTTCATATGTTGATGAAGAAGTACATAATTACCAAACCTATGCTGATCCACTACCAGACATAAGAGAAATCCCAATAAACAGTTCAATAAATGGTCAATTTTTCTGTGGATTGGGTAGTGAAGGGGATAGTTGGCCCCCTCATGGATCACATTTGTCAGTAACACTAAGTGGTCATTCAACAGAAGATGACAGTTCACAGATTCAATTCACAAATTGTTGTTCTCCTTCTACAACATGGGGGCAAGAAAATGACTTGTACTTTGCTTCTTCTGGTGGAGCAGACTTTTGTCATTCTCATTTCTTCAATTCTACTGAGAGCATATCAAGCAGTGGAAAATCCAAAGCACTATGGTATAAGATCCGGAGTGCTCTAAAATGTGCAATATTAATCGGAAGGGATGCAATTGCCAGAAGGAATGCCAAGCTGTTAAAGTATAACTATTAG 1767 0.3984 MVSSHRQSREEHGGDDRRHRIPIQESKQKHSDPKQAAFSGLGNVLKGLWSNDLELYFERFLRRVVREEVERKIPDYLCTRATANQAGISRTTHFQLRFISKLADTIFTHTDIIAEDNTPIQIALFDVRSQSIVNVGPLSCIKIEICPLNGEFSFNDNEDWTEDDFNANILRERDGKRPLLNGDRFIALKNGVGCINKLVFTDNSRWIRSRKFRLGAKVVQPISSETSIKEGRSEPFVVKDYRGESYKKHYPPSLNDDVWRLEQIAKDGKIHKRLSFHGIHTVQDLLRLYTTNQSLLYEKVGNIPKRSWLAIIEHAKTCVIDDDKPYVYRTAEQPIGLLFNSIYVLVGVTFDGQNYCSPDILTPNEKVHKHLVEIVKQHAYKNVNHLKPIDDTSLSCLRPLACLGAGQSSATDQGLQQFNISTVNEGHQETWSGYDQPFTSTSYVDEEVHNYQTYADPLPDIREIPINSSINGQFFCGLGSEGDSWPPHGSHLSVTLSGHSTEDDSSQIQFTNCCSPSTTWGQENDLYFASSGGADFCHSHFFNSTESISSSGKSKALWYKIRSALKCAILIGRDAIARRNAKLLKYNY. 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06471 588 Pfam Calmodulin binding protein-like N-terminal domain 94 240 IPR046831 -
Seca8g06471 588 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Seca8g06471 588 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Seca8g06471 588 PANTHER OS02G0177800 PROTEIN 30 499 IPR012416 GO:0005516
Seca8g06471 588 MobiDBLite consensus disorder prediction 1 35 - -
Seca8g06471 588 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06471 Seca-Chr8 159125169 159128521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06471 57 579 Calmodulin-binding Proteins AT4G25800 33.097 3.68e-88 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06471 - - gmx:100806598 692.575