Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06463 ATGGCGACAGAGCCAATCTTGCCATTATCTGTTGTATCTGTGATTGAAGATGTTCTTCAAAGACATGGAAGCCGATTAAGCGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCTGGGTGGCTGCGAACGACAGTTGGAGTGGTTGGAGGGAAAGACATGTCAGCTGAGCCTTCTGAAGAAGATTTCAGGATTGCATTGCGTAGTGGCATTATACTTTGCAATGCTCTTAACAAAATTCAACCTGGAGCCATTCCCAAGGTAGTTGAAGCCCCTGGTGATAATATTATTATTCCGGATGGGGCAGCACTATCTGCTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTGGCTGTGGAGGAAATGGGGCTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGGAAATCTTCAAGGATAGTGAATTGTGTTCTAGCTCTCAAGTCGTATAGTGAATGGAAACTGGGAGGCAAAAATGGGTCATGGAAATATGGTGGGAATCCAAGGCCACCTACGCCTGGGAAACAAGTTGTGAGGAAAAACTCAGAACCATTCATGAGGTCTTTGTCAAGAGGCATGTCATCAGGTGATAAAGATGGTTGGCCGAGTGATGTCTCTTCAAACACTGAAGTGGAGCATGAACGCATTGAAGGGGGTTCTATTCCTTCCTTGAATTCACTAATTCGTGACATTTTGTCAAATAGGAAGCAAGAAGAAATTCCCATTTTACTTGAGTCTCTGCTTAGCAAAGTCATGGAGGAGTTTGAACATCGCATGCTAATACAACAAGAAACGTTTAAAACAACTCAAGAAGATAAGACACCATCTGAATCAGAGAATTCAAATTTAAAAGCGGCTAGTGATGATGAAGAGATGGAAGAAAATGAAGATGTTGAGATTAAACAAAAGGAATTTCATGATGTGAAGTACAATGATGATGAAGAATCGAGGAGCGAGCTTTTGAAGCAACAAAGATTAGTTCGACAACAAAAAGAAAACGTCCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAGTGCAGTTCTTGCAAAAGAAATATGAGGAGGATTTCATCTATCTAAGTAAGCACCTGCATAGCCTAGCTTCAGCTGCTACAGGATATCAGAAGATTCTTGAAGAAAACCGCAAGTTATACAATCAAATGCAGGACTTGAAAGGAAATATTAGGGTGTACTGCAGAGTTAGACCCTTAATAGGTGGGCATCCAAACCATCATAGCCCTGTCAGTAACATAGAGGAAGACAGTATCTCACTCATAACATCTTCCAAAAATGGGAAAGAGGTGAGGAAGACATTTAGTTTCAACAGAGTGTTTGGTCCTTCTGCAACACAAGCTGCGGTTTTCTCAGATACTCAACCCCTAATTCGTTCAGTTCTAGATGGCTACAATGTATGTATATTTGCCTATGGTCAAACAGGATCAGGAAAAACACACACTATGTCTGGACCAAACAATCTTACTGAGGAAACAGTAGGGGTCAACTATCGTGCACTGAGAGATCTTTTCCTTATATCAGAACAGAGGAAAGACACCATTCACTATGATATCTCTGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACTTATTAACGACAGATGGTGCTCACAAAAGATATCCTTTTCTCCACACTAACTAG 1701 0.4098 MATEPILPLSVVSVIEDVLQRHGSRLSDIDLASRKAEEASSRRNEAAGWLRTTVGVVGGKDMSAEPSEEDFRIALRSGIILCNALNKIQPGAIPKVVEAPGDNIIIPDGAALSAYQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKLGGKNGSWKYGGNPRPPTPGKQVVRKNSEPFMRSLSRGMSSGDKDGWPSDVSSNTEVEHERIEGGSIPSLNSLIRDILSNRKQEEIPILLESLLSKVMEEFEHRMLIQQETFKTTQEDKTPSESENSNLKAASDDEEMEENEDVEIKQKEFHDVKYNDDEESRSELLKQQRLVRQQKENVQELKMMVHQTKTGVQFLQKKYEEDFIYLSKHLHSLASAATGYQKILEENRKLYNQMQDLKGNIRVYCRVRPLIGGHPNHHSPVSNIEEDSISLITSSKNGKEVRKTFSFNRVFGPSATQAAVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNNLTEETVGVNYRALRDLFLISEQRKDTIHYDISVQMLEIYNEQVRDLLTTDGAHKRYPFLHTN. 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06463 566 Pfam Microtubule binding 392 551 IPR031852 GO:0008017
Seca8g06463 566 SUPERFAMILY Calponin-homology domain, CH-domain 34 185 IPR036872 -
Seca8g06463 566 SMART ch_5 42 160 IPR001715 GO:0005515
Seca8g06463 566 Coils Coil 330 350 - -
Seca8g06463 566 Gene3D Kinesin motor domain 346 564 IPR036961 -
Seca8g06463 566 MobiDBLite consensus disorder prediction 280 298 - -
Seca8g06463 566 SMART kinesin_4 404 565 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06463 566 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 348 560 - -
Seca8g06463 566 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Seca8g06463 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 560 IPR027417 -
Seca8g06463 566 Coils Coil 386 406 - -
Seca8g06463 566 CDD CH_AtKIN14-like 42 159 - -
Seca8g06463 566 Gene3D - 32 162 IPR036872 -
Seca8g06463 566 MobiDBLite consensus disorder prediction 276 307 - -
Seca8g06463 566 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Seca8g06463 566 ProSiteProfiles Kinesin motor domain profile. 406 566 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06463 566 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 559 IPR027640 GO:0003777|GO:0007018
Seca8g06463 566 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06463 Seca-Chr8 159041177 159047927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06463 394 558 Calmodulin-binding Proteins AT5G65930 38.182 5.47e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06463 K10406 - gmx:100808197 794.653