Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06440 ATGGGGCATTTTTCATCTATGTTCAATGGGTTGGCAAAATCATTTGCAATGAAGAAAGGGAAGAATTCTGGTAGATGTAGCGGGAGAGAAGCTGCGGAAGCAATGGCAAAGGAAGCTAAAAAGAATCACTCCATGCTGCATAGCTCAGGCACTGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCATGGGGTCACTTTGTGGCCAGAAGAGTAAGAGAATCATTGCCACCCTCTTTGCTATGCAACTGGCAAGAGACTCTTTCCCAAAATTCACTTGATCCTGATATTGATATAGAGACAGAGAAAAAACATCACCGGTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGTCATTGATCAAGAACTACAACAGAATCGCAAGATAGATTCATTTTTCAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGACTCTCGTGCTGTTTTAGCTACAACATCAGATGATGGAAATTTGGTATCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCACAGGAGGCAGAGCGAATACTTGAGTGTCAAGGGAGGGTGTTCTGCTTACACGATGAGCCAGGAGTGCACAGGGTTTGGTTGCCAGATGAGGAGTCCCCAGGATTGGCCATGTCTAGAGCTTTTGGTGACTACTGTGTGAAAGAGTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACCAACAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCGAATCAAGAAGCGGTGGATATTGTGTCTTCATCTTCAACAGCAGACAGAACAAATTCAGCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAACGCAAGAGGCGGGGTATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCTTCACCTGAGCAAGTTGTTGCTACCCTAAAATAG 1104 0.4339 MGHFSSMFNGLAKSFAMKKGKNSGRCSGREAAEAMAKEAKKNHSMLHSSGTVNVDGSNNFASVFSKRGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVARRVRESLPPSLLCNWQETLSQNSLDPDIDIETEKKHHRFNIWKHSYLKTCAVIDQELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGNLVSVQLTVDFKPNLPQEAERILECQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITNRDQFVVLATDGVWDVISNQEAVDIVSSSSTADRTNSAKRLVECAMHAWKRKRRGIAMDDISAICLFFHSSSPEQVVATLK. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06440 367 PANTHER PROTEIN PHOSPHATASE 42 352 IPR015655 GO:0004722|GO:0006470
Seca8g06440 367 SMART PP2C_4 51 352 IPR001932 -
Seca8g06440 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Seca8g06440 367 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Seca8g06440 367 CDD PP2Cc 59 354 IPR001932 -
Seca8g06440 367 SUPERFAMILY PP2C-like 59 355 IPR036457 -
Seca8g06440 367 Gene3D - 27 357 IPR036457 -
Seca8g06440 367 FunFam Probable protein phosphatase 2C 34 51 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06440 Seca-Chr8 158842784 158846446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06440 1 355 PP2C-type Phosphatase Gene Family AT3G05640 71.709 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06440 - - gmx:100793051 641.343