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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca8g06431
ATGAAGACATCCACTCTTGTTTTTCCACTCTTGTTTCTCTTATTCCTTTCTCCCTCTCTTGCAGCTTTATTCTCAGCCTCCCCAAATACCACATGTGACCTTACACCCTACCCGGCATTCTGCACAACTACTCTGCCTTCTAACTATTTCTATTTATCCATACATGACCAAGCCCGTTTCTTCCTTCAACATTCCTTGTCAACAACAAAAACGATTCTTGAATTGATCTCTTCTTATCTCAGAGACCAGTCCACTATTCCTGATTCCACACTAAATGCCCTTGAAGATTGTCTCAATCTTGCTGAGCTTAATATTGATTTCTTGTCCAATGTCCTCCAAGCCATCCAAAAAACTACCACCATAACTACCTATCAGGCTTATGATTTGCAAACCTTTCTTAGTGCCGTTTTAACCAATCAACAAACATGCTTGGATGGTTTTCATGAGGTAACTCCTTATCCTAGAGTCACCAGTGGCTTATCAAGCCCTCTTTCTGATGGAATCAAACTTTATAGCATATCTCTGGCACTTTTCACCCGCGGTTGGGTTAGCAATGCCACAGGAAGATCAAAAATAGTTGAAATGACCATGAATAGAAAGTTACTTCAGAAAAACATTGACAATTTAGTGGTGACAAAAAAGGTGGTGGTCAACCCTGATGGTTCTGGGGATTTCACAACCATAAATGATGCAGTGGATGCTGCACCTAACAATACCGGCACCAACAATGGGTACTATGTAATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCTATTGCTAAGAGCAAGGAGAACCTTATGATCATTGGAGATGGTATTAACAGCACTGTGATCACCGGCAATCGTAGCGTGGTTGATGGTTGGACCACTTTCCAGTCCGCCACTTTTGCTGTGGTAGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGCAATACTGCGGGGTCCAGCAAGCATCAAGCGGTAGCTGTGAGAAATGGGGCGGACATGTCATCATTCTACAATTGTAGTTTTGAAGGGTACCAAGACACATTGTACGCTCATTCCCTTAGGCAATTTTACAAAAACTGTGACATTTATGGCACAGTGGATTTTATATTTGGCAATGCAGCAGCAGTATTCCAGAGCTGTAACATGTACCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGCAGAACAGATCCTAACCAGAACACTGGATTCTCCATACAGAACTGTTGCATAGTAGCTGCCAGTGAGTTAGGTGATACTAGTAGTAATTATAATAACATAAAGACATATTTGGGTCGGCCTTGGAAGGAGTATTCAAGGACGGTTTATATTCAATCTTTCATGGATGGCCTAATTGATCCAAAGGGTTGGATTGAATGGTCAGGGGATTTTGCTTTAAGCACACTGTATTATGCAGAATTTGCTAACTGGGGACCAGGTTCAAATATTAGCAATAGAGTCACATGGGAAGGGTACCATCTCATTGATGAAAAGGATGCAAATGATTTCACAGTGGACAGATTTATACAAGGTGACACATGGTTGCCCAAGACAGGAGTGCCTTTCAAAGCAGGGTTACAGTGA
1596
0.416
MKTSTLVFPLLFLLFLSPSLAALFSASPNTTCDLTPYPAFCTTTLPSNYFYLSIHDQARFFLQHSLSTTKTILELISSYLRDQSTIPDSTLNALEDCLNLAELNIDFLSNVLQAIQKTTTITTYQAYDLQTFLSAVLTNQQTCLDGFHEVTPYPRVTSGLSSPLSDGIKLYSISLALFTRGWVSNATGRSKIVEMTMNRKLLQKNIDNLVVTKKVVVNPDGSGDFTTINDAVDAAPNNTGTNNGYYVIYVVAGIYNEYVSIAKSKENLMIIGDGINSTVITGNRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSSFYNCSFEGYQDTLYAHSLRQFYKNCDIYGTVDFIFGNAAAVFQSCNMYPRLPMQNQFNAITAQGRTDPNQNTGFSIQNCCIVAASELGDTSSNYNNIKTYLGRPWKEYSRTVYIQSFMDGLIDPKGWIEWSGDFALSTLYYAEFANWGPGSNISNRVTWEGYHLIDEKDANDFTVDRFIQGDTWLPKTGVPFKAGLQ.
532
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca8g06431
531
Gene3D
-
209
530
IPR012334
-
Seca8g06431
531
SUPERFAMILY
Pectin lyase-like
212
529
IPR011050
-
Seca8g06431
531
Pfam
Plant invertase/pectin methylesterase inhibitor
29
177
IPR006501
GO:0004857
Seca8g06431
531
ProSitePatterns
Pectinesterase signature 2.
361
370
IPR033131
-
Seca8g06431
531
PANTHER
PECTINESTERASE
18
520
-
-
Seca8g06431
531
Pfam
Pectinesterase
215
516
IPR000070
GO:0030599|GO:0042545
Seca8g06431
531
CDD
PMEI-like_3
30
182
-
-
Seca8g06431
531
NCBIfam
pectinesterase inhibitor domain
2
178
IPR006501
GO:0004857
Seca8g06431
531
FunFam
Pectinesterase
208
530
-
-
Seca8g06431
531
Gene3D
Invertase/pectin methylesterase inhibitor family protein
26
180
IPR035513
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca8g06431
Seca-Chr8
158761783
158764183
Dispersed/Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca8g06431
11
530
Carbohydrate Esterase
AT4G02330
50.877
0.0
557
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca8g06431
K01051
-
gmx:100810329
840.106
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