Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06407 ATGACTTTTAGTTGGAAGAAAATGGGTTGTGGTTCTGAGCTTCTTACCATGATCCTCATCATCACCCTCTTGATGCTCCTATCATCACAAAGAACCCACATTTTGACTGTTCGTGATCTAATGAATGCTGCAGGAAGCTTCCACGTTCATAGCCTACCAGAGATGTATTTCATGGAGGAGAATGAACAGGAAAATGAATACAAGATTAAGAAAATCTCAGGACTGGATGAGAATGAAGAGAAACAAGCTTTTATAGTGGAAAAGTTTAGATCTTTGCTTGGACTAAAGAGTTTCCACACCAGGGTACCATCCAATGGTGGAGATTCTGAGTTTCTCTCACCAGAACCTTCTCCATCACCCATCATTGAAGCTGAGGCACCAGCTCCTGCTCCAATAATTCACCTCCATCCTCATTCCCATCATCCACGACATCACACTCATTGGAATCTTCCACCTAACAAAACTCATCATGAAGATAGAGGCAGAGCTAAGAGAATACTAGTAGCTGTTCTTGTATCTGTGGGTGTTGCTGCATTAGTTGGTGCTTTTGGGTTAATCTTGGTCTGCAGGAAATTCATGAATCAGAAAAAGAAACCCAAAAGGACAATGCCTCTGTGTACCAAGAACAAAGGAACTGGAGGTGCTTATCAAAATTCATCAAACAAGGTGAGTTTAAACTCAGGACTAGATCTGTTTTATCTTGATGCTTTAGGTGAGGATATAGAACAACACGCTTGCAGCTTGAATAAGCCTTGCAAGAATAGTTCAGATGATGATAATGTTAGCAGTTCTTCCACCAAGGAAATTGTGTCTGTTCATGAGGATGTGGAATTAGTGAAACGTGAGGCTGAATCTGTTGATTGCAACTCTTCTTCTGGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGATAATGAAAGTTTTCATTCCTTTGTTGATTCACAATCAAATATTAGACTTTCAAATGCCTCTGCTGGTAGTTTGAGTGACACACACTCTATGTCCCCTCAAAATTCAAGTTTATTAGCAAACCAATTTCCTAGTTCACCTCAGAAATCAATCTCAAACAGACAACCTCACCAACCATCATGTAGTCCAAAACATGAAGAGCAAGAAGAGGTTGAGGTCTCTTTCCAATGTCCAAAAACCTCCATTTCCACATCCACTTCCCCTCCACCTCCTCCTCCACCCCCTCCACCCCTGCAAATGCCACTGTTTTCTTTGCATTCTCTTACTACTTCATCTAGAGTTTCCTCTCAATCCCCACTTTCATTGACATCTCATAATTTGTCATCTCCAACAGACACTTTCTCAGGATCAAATCAAAGTCCAGAAATAGAGTTGCTTTCTCCACCTCAATCTAACCCAACAAAATCTCCTCCCAACATTCCCCCACCACCATGCCCACCTTCATTTCTAAAAGGCAACAGCAACAGTGCCAAAACCCCACCTCCACCACCATCTCAACTCCCTCAATTTACCCCATTAGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTGCATTGGGACAAAGTAAGAGCTGCACCAAATCGCACAATGGTTTGGGATAAGCTACGATCAAGCTCATTCGAGTAA 1605 0.4181 MTFSWKKMGCGSELLTMILIITLLMLLSSQRTHILTVRDLMNAAGSFHVHSLPEMYFMEENEQENEYKIKKISGLDENEEKQAFIVEKFRSLLGLKSFHTRVPSNGGDSEFLSPEPSPSPIIEAEAPAPAPIIHLHPHSHHPRHHTHWNLPPNKTHHEDRGRAKRILVAVLVSVGVAALVGAFGLILVCRKFMNQKKKPKRTMPLCTKNKGTGGAYQNSSNKVSLNSGLDLFYLDALGEDIEQHACSLNKPCKNSSDDDNVSSSSTKEIVSVHEDVELVKREAESVDCNSSSGDKIIPEDCHSSDNESFHSFVDSQSNIRLSNASAGSLSDTHSMSPQNSSLLANQFPSSPQKSISNRQPHQPSCSPKHEEQEEVEVSFQCPKTSISTSTSPPPPPPPPPPLQMPLFSLHSLTTSSRVSSQSPLSLTSHNLSSPTDTFSGSNQSPEIELLSPPQSNPTKSPPNIPPPPCPPSFLKGNSNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFE. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06407 534 ProSiteProfiles Formin homology-2 (FH2) domain profile. 497 534 IPR015425 -
Seca8g06407 534 MobiDBLite consensus disorder prediction 407 454 - -
Seca8g06407 534 MobiDBLite consensus disorder prediction 388 405 - -
Seca8g06407 534 MobiDBLite consensus disorder prediction 324 363 - -
Seca8g06407 534 MobiDBLite consensus disorder prediction 248 268 - -
Seca8g06407 534 MobiDBLite consensus disorder prediction 282 301 - -
Seca8g06407 534 PANTHER FORMIN-RELATED 422 534 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca8g06407 534 MobiDBLite consensus disorder prediction 455 473 - -
Seca8g06407 534 MobiDBLite consensus disorder prediction 324 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06407 Seca-Chr8 158530910 158535022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06407 482 534 FH2 protein (formin) Gene Family AT3G05470 79.630 9.21e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06407 - - gmx:100793761 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06407 8 158530910 158535022 Seca8g06407 8 158530910 158535022 ECH