Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06392 ATGTATCAGCTGAGGAGCTTGAGTTTGCAATTTGATCTCATTGTTTATGCACCATATCGCTCTATTGAAGGTTTTCTAAATGATATGGAGGAATTTTGCAATGCCGGTGACGACCAACTTCAAATGCTCAAGACTTTGCAAGATACAGCTAGACTGGAAGTTGATAAAATGATGCTTACTGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCAGCATTGTGCAACTCAAATGCACTCCATAAAGTTATTGACTTTGATAGTTATCTAAGCAGCATTTTTTCCCGTCAGAATACCATGCATACAATGTCCGAGCTTTTTGAATCATTGGATGCGATTGATTCTTGGGTCAGAAAATACAAATTTCCTTCAGAGAAGGAATTGAAGCATATCAACCGGAAACTAAAGTCTTGTTGGGGTCTTAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCAAATGAAGCACAAAATGTGCCATCTCATGTCTAG 525 0.4038 MYQLRSLSLQFDLIVYAPYRSIEGFLNDMEEFCNAGDDQLQMLKTLQDTARLEVDKMMLTDAPLLFPPGQLALAALCNSNALHKVIDFDSYLSSIFSRQNTMHTMSELFESLDAIDSWVRKYKFPSEKELKHINRKLKSCWGLSSHDEGKKREKKSKHKSKKSSNEAQNVPSHV. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06392 174 Pfam Cyclin C-terminal domain 18 124 IPR031658 -
Seca8g06392 174 SUPERFAMILY Cyclin-like 18 143 IPR036915 -
Seca8g06392 174 CDD CYCLIN_AcCycH_rpt2 16 140 - -
Seca8g06392 174 MobiDBLite consensus disorder prediction 143 174 - -
Seca8g06392 174 Gene3D - 16 121 - -
Seca8g06392 174 FunFam Cyclin h 16 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06392 Seca-Chr8 158196722 158200328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06392 2 119 Core Cell Cycle Gene Families AT5G27620 59.664 1.20e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06392 K06634 - gmx:100790589 288.115