Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06384 ATGAACGATCAAAGCACTCAAATTCAAATGCTCGCTGAAAAATTTCACCGCTTCGTTCTTGATTGCGAACTCAAGCAATCGTCAACTGCTAACCGTTCAGATAATGTATCGAAGCAAGTGAACGATAACGATAACTCTGACTCCATGGATGAAAACAGTTTGTCCAATGGAATCCATGAAACTTCTCCAGATCAGGATCACACACTCCCGATTTTAAAGAAAATCCTTAGTCTGAGTACCAAAATTCAGGATTTGAAGAAGCAGCACATAGCCTTATCTAACCAAGTTAAAGTGAATCTCACAACTGAATCGTTTCCGGGCCTTGACGTTTTGAACTCTATTCAGCTTCTCGGCACTGAATATGAGCTTTTGAAAAGAAAGTATCTTGAGGAATGCTCTGAACGCCGGAGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATTAGGGTTTTCTGCAGATGCAGACCGTTAAACGAAAGTGAAATTGCAAATGGGTCTGCATCTGCTGTCAATTTTGAATCATCTTCTGATAATGAGCTTCAAGTCATCTGCTCAGATTCTTCCAAGAAGCAATTTAAATTTGATTACGTATTTAGGCCTGAAGATAACCAAGAGGCTGTTTTTTCCCAAACTAAACCCATCGTTACATCAGTATTGGATGGGTTTAATGTCTGCATTTTTGCCTATGGGCAAACTGGAACTGGTAAAACATTTACAATGGAGGGAACGCCAGAACACAGGGGAGTTAACTACAGAACCCTGGAGGAATTATTTCGGATAGCTGAAGAGAGACATGGTGTAATGAAGTATGAATTGCATGTTAGCATGTTAGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTACCCAACCTACCAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTTTGTGGAACAGAAGATGTGTGGGAATTGCTTAAGACTGGAAATCGAGTCAGGTCTGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTTGTTGGGGAGAATTTGATCAACGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTGGCTGGCAGTGAGCGTGTTGGAAAAACTGAAGCCGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCACTCGGTGATGTTATTTCTGCCCTTGCTTCCAAATCAGCCCACATCCCTTACAGGAACTCGAAGCTCACTCATATACTGCAGAGCTCTTTAGGAGGAGATTGCAAAACGTTAATGTTTGTCCAAGTAAGTCCAAGCGCAACAGACTTAGGAGAGACACTTTGTTCCTTGAATTTTGCCACCCGTGTCCGCGGAATCGAGAGTGGCCCAGCTCGCAAGCAAGTTGACCTCAGTGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGCTCAAACATGAGGAGAAGGAAACTAAGAAATTACAGGACAACTTTCAAACCTTGCAACTCAGGCTTGCTGCTAAAGAACACCATTGTAGAAACCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGGTAGCAGAAGAAAGAAAAACCAGACTAAAGCAAGAAAGTAGATCACTTGCTGCTGTTTCAGCTCAACCTTCATCATCAAAACACACAGCAGCTAATAAAACCATGACAGATAAGAAGCCGCCACTGAATCCTTCAAAACTGAGACTGCCACTTAGAAGAATAACTAATTTCTTGCCTCCACCATCTCCTCTAACATCAAAAAAATATGCCACTTTCAAGAATGGAAAGGAAAACTCGGCCAGAAGGACCTCAATGACAACAAATGCAGAAGCCTTTGCGAAACCAAGAAGCAGGACATCCATTGCTATGAGACCACAGCCTGTACCATCAACTAGGCAGGTCTTTCAGCCAAGGAGGCGGGTCTCCATTGCCACACCATGTCCTGACACAACAACTTCTGACTTAACATCACAGGTCCTTAAGCCAAAGAGGCGGGTCTCCATTGCTACAATCCGTCCTGACACAACTTCTGACTTAACAACTCCACTCCGTACCTCAGCCTCCAGATTTATTGGGGGAAGCAGTGTATCACTTATAAGGAACCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCATTGCCTGAGTTGAGAGCATCAGTTGAGACAACACCAATGTCTGTTAGAAGCAGCAGCAGCAAGTTCAGAAGCAGTCCAACACAGGCAGATTCCAGGGTGGGTAGGCATCCAACTGTCCTTTCACTGCAACGGAGACCTATAGTCTGGAGTCCTCTCAAGCTGAGAGCGGCCTTGAGAAGTAACCGAAAGTCACGGCCTTGA 2391 0.4358 MNDQSTQIQMLAEKFHRFVLDCELKQSSTANRSDNVSKQVNDNDNSDSMDENSLSNGIHETSPDQDHTLPILKKILSLSTKIQDLKKQHIALSNQVKVNLTTESFPGLDVLNSIQLLGTEYELLKRKYLEECSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGSASAVNFESSSDNELQVICSDSSKKQFKFDYVFRPEDNQEAVFSQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRIAEERHGVMKYELHVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQEVPGLVEARVCGTEDVWELLKTGNRVRSVGSTCANELSSRSHCLLRVTVVGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSATDLGETLCSLNFATRVRGIESGPARKQVDLSELFKYKQMAEKLKHEEKETKKLQDNFQTLQLRLAAKEHHCRNLQEKVRDLENQVAEERKTRLKQESRSLAAVSAQPSSSKHTAANKTMTDKKPPLNPSKLRLPLRRITNFLPPPSPLTSKKYATFKNGKENSARRTSMTTNAEAFAKPRSRTSIAMRPQPVPSTRQVFQPRRRVSIATPCPDTTTSDLTSQVLKPKRRVSIATIRPDTTSDLTTPLRTSASRFIGGSSVSLIRNQRKDRYSSLFAPLPELRASVETTPMSVRSSSSKFRSSPTQADSRVGRHPTVLSLQRRPIVWSPLKLRAALRSNRKSRP. 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06384 796 Pfam Kinesin motor domain 154 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 FunFam Kinesin-like protein 143 512 - -
Seca8g06384 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 509 IPR027417 -
Seca8g06384 796 Gene3D Kinesin motor domain 143 516 IPR036961 -
Seca8g06384 796 ProSitePatterns Kinesin motor domain signature. 372 383 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca8g06384 796 CDD KISc_C_terminal 146 473 - -
Seca8g06384 796 ProSiteProfiles Kinesin motor domain profile. 148 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 MobiDBLite consensus disorder prediction 542 583 - -
Seca8g06384 796 SMART kinesin_4 146 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 Coils Coil 489 551 - -
Seca8g06384 796 MobiDBLite consensus disorder prediction 740 764 - -
Seca8g06384 796 MobiDBLite consensus disorder prediction 550 576 - -
Seca8g06384 796 MobiDBLite consensus disorder prediction 30 63 - -
Seca8g06384 796 MobiDBLite consensus disorder prediction 739 765 - -
Seca8g06384 796 PRINTS Kinesin heavy chain signature 222 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 PRINTS Kinesin heavy chain signature 373 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 PRINTS Kinesin heavy chain signature 422 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06384 796 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 614 IPR027640 GO:0003777|GO:0007018
Seca8g06384 796 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06384 Seca-Chr8 158047989 158052248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06384 114 499 Calmodulin-binding Proteins AT5G65930 41.058 3.67e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06384 K10406 - gmx:100788477 1197.96