Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06358 ATGACCTGCCCTCCTAGGAAAGGAGGTTCAAAACTAGCAAATACTTATTTTGCACCCCCCATTGTTTTGTTCACTACCTACCATAAACAAAACCCCTCTCCCTCACCATCTCTTACTTCATGCCTTCCCATCCCAACCTTCTTTTGCACCTCAAACAGAAAGCCATCTAATTTCCCTTTTTTTTCTTGGTTTGCTCTGTGGTCATCCATGGAAGTTAACACTACTAACACTGCAGGGCCACCCACTGTTGCTACAAAGAACCATACTTTCACACAGCACCACTTAAATTCAGAAAACCATAAACACAGCCATGACCATTTCCCCTTCAAAGCCATTCTCATAACCATTTCAGTGGTAACCTCAGTTACAATCCTATTTATCATTTTTCTGGTTGTATGCTTGATCCGTCGGCAAAAATCTTCCAACCAGAATGAAACTAGCAAAGATGACAGTAGAATACTTCATGACACAAGCAGCAGGCTCATAGCTTCAACAATGTTAAACTCTAATTCTAGCCCAGAGGATTACAATAATTTTGTCTCTAGCATATGCATTTCATCAATTCAAACATGTCTTCAGTATTCAGAAGGGACACCAACACCTAAATTTAGAGGAGTTCAAGTGTTTACTTATAGGGAGCTAGAAGTTGCAACGGATGGATTCAGTGAAGCAAATGCGATTGGTAATGGAGGGGTTGGTTTGATATATAAAGGAGTCTTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTGAGGAGTGAAGGTAAGCAAGGAGAGCGTGCATTCAGAATTGAGGTCGATCTCCTAAGCCGGTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAAAACCACAGGTTATTAATTTTTGAATACTTGCCCAATGGTACACTCCAACACCATCTTCACTCCCCCAATGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCCTGGAGTTCCTGCATGAACATGCAGTCTCACCAGTGATCCACCGAGACTTCAAGAGTAACAATGTTCTACTGGATCAAAATTTCCGTGCCAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAATGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTCACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTAACAGGACGTGTACCAGTTGACATTAAAAGGGCCCCTGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCTAGGTTGACGAACAGAGAAAAGGTGGTGGAAATGGTTGACCCAGCTCTACGCGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCGGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTGGTACCACTTGTCCGTAACACATCTTCTCTTGGTTCATCCAGTTCCCTAAGATTTCATAAACAAATACTAAGACCAAGTCATTAG 1566 0.4387 MTCPPRKGGSKLANTYFAPPIVLFTTYHKQNPSPSPSLTSCLPIPTFFCTSNRKPSNFPFFSWFALWSSMEVNTTNTAGPPTVATKNHTFTQHHLNSENHKHSHDHFPFKAILITISVVTSVTILFIIFLVVCLIRRQKSSNQNETSKDDSRILHDTSSRLIASTMLNSNSSPEDYNNFVSSICISSIQTCLQYSEGTPTPKFRGVQVFTYRELEVATDGFSEANAIGNGGVGLIYKGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQNHRLLIFEYLPNGTLQHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNTSSLGSSSSLRFHKQILRPSH. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06358 521 ProSiteProfiles Protein kinase domain profile. 221 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06358 521 PANTHER OS07G0668900 PROTEIN 152 503 - -
Seca8g06358 521 CDD STKc_IRAK 227 497 - -
Seca8g06358 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Seca8g06358 521 Gene3D Phosphorylase Kinase; domain 1 193 296 - -
Seca8g06358 521 FunFam Receptor-like serine/threonine-protein kinase ALE2 297 510 - -
Seca8g06358 521 Pfam Protein tyrosine and serine/threonine kinase 225 494 IPR001245 GO:0004672|GO:0006468
Seca8g06358 521 SUPERFAMILY Protein kinase-like (PK-like) 199 494 IPR011009 -
Seca8g06358 521 FunFam Serine/threonine-protein kinase PBS1 192 296 - -
Seca8g06358 521 Gene3D Transferase(Phosphotransferase) domain 1 297 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06358 Seca-Chr8 157842902 157846908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06358 205 514 Receptor kinase-like Gene Family AT3G58690 65.300 4.22e-151 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca8g06358 PK_Tyr_Ser-Thr 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06358 - - gmx:100499645 677.167