Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06348 ATGTGCTGCTTTCAAATGCAGTTCACAAAATCCAAGACAACATCAGCTCAAGACTCTGCATTAATAATAACCTCAACTATAATCGTTGTGCTATTCAGTACTGTGGTATTTGGTTCCATAACAAAGCCTCTGATTGAGGCTGTGCAGCTAAGGCATTCAAAACCAGCCATTTCTGATTCCACTGATAATCAAGAAGATGTGAGATTTCTTTTCCTTCAAAACAGTGGTTCAATTAACCAAAGCAACAATCAGACATTTGAAAGGCGAAGTAACCTGAGTTTGCTAATAAGTCATCCAGCTACAACGGTTCACTACTTTTGGAGGAAATTTGATGATAACTTTATGAGACCAGTATTTGGTGGAAGGGGTTTCACTCCGATTGTTCCTGGTTCTGGTGAAGAAGAGGAGATTGCTTGA 417 0.3933 MCCFQMQFTKSKTTSAQDSALIITSTIIVVLFSTVVFGSITKPLIEAVQLRHSKPAISDSTDNQEDVRFLFLQNSGSINQSNNQTFERRSNLSLLISHPATTVHYFWRKFDDNFMRPVFGGRGFTPIVPGSGEEEEIA. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06348 138 PANTHER SODIUM/HYDROGEN EXCHANGER 18 119 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06348 Seca-Chr8 157757176 157757972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06348 7 136 Antiporters AT5G27150 44.697 7.00e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06348 K14724 - ccaj:109808105 186.037