Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06347 ATGGTTTACTATTCTATTTTTAATGTCAGTCATTTTCTTAACACATTACCATGTTGGAACAGCATAGGAACTTCAGTTGCTGTCAGTTCAACCTTGATTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAACATTAAAAATTGCATCAAGACAAGAGAGAGTACCAAAATTGAGTTTCGATCACAGTTTATAATATGGTGGGCGGGCCTAATGAGAGGTGCCGTGACTATTGCCTTGTCTTATAACCAGGCAAGTACATGGTAA 279 0.3799 MVYYSIFNVSHFLNTLPCWNSIGTSVAVSSTLIALVLIGRAAFVFPIANIKNCIKTRESTKIEFRSQFIIWWAGLMRGAVTIALSYNQASTW. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06347 92 Pfam Sodium/hydrogen exchanger family 30 85 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g06347 92 PANTHER SODIUM/HYDROGEN EXCHANGER 21 88 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06347 Seca-Chr8 157756783 157757132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06347 20 88 Antiporters AT3G05030 59.420 1.18e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06347 K14724 - ccaj:109787707 129.413