Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06322 ATGGCTTTTGAAATCAGTTCTGTTGTCTCAAAATTACAAATGCTATCCACTTCCGACCATGCCTCCGTAGTGTCCATGAACTTATTTGTAGCACTGCTATGTGCTTGTATTGTGATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCTATCACTGCCCTTATAATTGGTGTTTTCACTGGCGTGGTCATTTTGCTGTTTAGTGGCGGTAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTCTTCTTTATATACCTTCTGCCGCCCATAATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTAAAAACTTCATCACTATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTGTCATCATAACTTTGGGTATGCCTTACCTCTTACCGCTTCAGATTTATGCATTAGGTTGTTATATTAGTTTTGACTTATTAAGAAAATATTTTGTAAGCCCAGCAGATTCTGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACTCCTTTACTGTACAGTCTTGTATTTGGTGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGTTTTGACCTCAACAAAATTGACCCTTCAATTGCTTTGCATTTTTTGGGCAACTTCTTGTATCTTTTTATCTCAAGTACACTGCTTGGGGTTGTGACAGGTCTACTCAGTGCGTACATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGACCGTGAAGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATGCTGGCTGAATTAACCTATCTGAGTGGAATTCTCACTGTATTCTTTTGTGGGATTGTCATGTCTCATTATACTTGGCATAATGTGACTGAGAGTTCAAGAATCACTACCAAGCATGCTTTTGCAACCTTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAGTGGAGGTTTGTTAGTGATAGCCCTGGAACATCTGTTGCAGTGAGTTCAGTATTGTTGGGTCTAATACTTCTTGGAAGAGCTGCTTTTGTTTTCCCTTTATCCTTCTTATCCAACTTGGCTAAAAAATCACCAAATGAGAAAATCAGCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGTCTCATGAGAGGTGCTGTTTCAATGGCACTCGCTTACAATCAGTTCACCATGTCGGGGCATACTCAACTGCGATGCAATGCGATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGCTTGCTGACAAAGCCACTCATTAGGCTTTTGCTACCTCCTCCTAAAATCACAAACAGCATGATATCCACAGATGCATCTACTCCAAAATCAGTCACAATCCCACTTCTAGGAAGTGCCCAAGATTCTGAAGCCGATCTTGATGGCCGTGAAATTCATCGTCCAAGCAGCATTCGTGCCTTACTATCCACTCCAACACACACTGTTCATAGATTATGGCGTAAGTTTGATGATGCATTCATGCGTCCTGTTTTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCACCAACTGAACGCAATGGTCAACAATGGCATTGA 1629 0.4138 MAFEISSVVSKLQMLSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALIIGVFTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFKNFITIMLFGAIGTLISCVIITLGMPYLLPLQIYALGCYISFDLLRKYFVSPADSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNKIDPSIALHFLGNFLYLFISSTLLGVVTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELTYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAVSSVLLGLILLGRAAFVFPLSFLSNLAKKSPNEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRCNAIMITSTITVVLVSTVVFGLLTKPLIRLLLPPPKITNSMISTDASTPKSVTIPLLGSAQDSEADLDGREIHRPSSIRALLSTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGQQWH. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06322 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca8g06322 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca8g06322 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca8g06322 542 Gene3D - 155 198 - -
Seca8g06322 542 PANTHER SODIUM/HYDROGEN EXCHANGER 16 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca8g06322 542 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06322 Seca-Chr8 157571141 157577560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06322 6 540 Antiporters AT3G05030 75.277 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06322 - - gmx:732573 856.67