Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06318 ATGCTTGTTCCTAACGGAGAAGAGCAGGTTCTGTTGCCTTCAGAAAATGCAAGTGAGGTTTCAAAGTCACCCTCATTGGATTTGAACCCAGATTCCGTTGATGGGTCCCCACCTCTTTCCACCGATTACACTGATGTGGGTGTCGTGCCAGAGCACCAAAAGAACGAGCTTAAACAATTGATATCCAATTTAGAAAGAGAAGTTGAGCAGCTGAGGGTCAAGCAGAGGATAGTGGATGAAAAGCGGAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTCGAGTATTTTGTAGAATTAGACCAATTCTGATAGCGGAGAAGAGAAGAGTTTCTGAACCCGTATCAGCTGGATCAGAGAGAATTCGGGTTAAACTGGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTCCCTCAAGAAGCAAGTCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGCCACAATGTGTGTGTTTTTGCTTATGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAATGAGCAGCCAGGAATTATTCCTCGTGCTCTTGAAGAGCTTTTTCGTCAAGCCTCTATGGATAGTTCATCTTCTTTCACCTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAATGTAAGGGATCTGCTGGCTCCAAGACAGTCTGGTAGACCACATGAACCTATGACAAAGTGCAATCTCAACATCCAAACAGATCCAAAGGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCTGATTGTGCTAAAGCTAGATGGTGGTACAACAAGGGCAGACGGTTCAGATCCACATCATGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGTGGGGACGCTTTGGAAGCCAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGGAGGCAGTGAACGGTTGCTGAAAACTGGTGCCAAAGGACTAACACTTGATGAGGGTCGAGCTATTAATCTTTCTCTTTCAGCTTTGGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTAACTCAAATACTTAGAGATTCACTCGGTGATGGCTCAAAGGTCTTGATGCTCGTGCATATAAGCCCTTCTGAAGAAGATGTTTGTGAGACAATTTGTTCTTTGAACTTTGCAAAGAGGGCAAGAGCAATAGAGTCTAATAAAGAAGTACCAGTGGTAAACTTACTGAAATTTGTCCTAAACTTAGTGTGTTTGGTTTACTAA 1332 0.4257 MLVPNGEEQVLLPSENASEVSKSPSLDLNPDSVDGSPPLSTDYTDVGVVPEHQKNELKQLISNLEREVEQLRVKQRIVDEKRREALSKILDIKGSIRVFCRIRPILIAEKRRVSEPVSAGSERIRVKLGGTRKDFEFDKVFPQEASQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQASMDSSSSFTFSMSMLEVYMGNVRDLLAPRQSGRPHEPMTKCNLNIQTDPKGLVEIEGLSEVQISDCAKARWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDALEAKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRKRCHVPYRNSKLTQILRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPVVNLLKFVLNLVCLVY. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06318 443 PANTHER KINESIN-LIKE PROTEIN KLP-3 54 438 IPR027640 GO:0003777|GO:0007018
Seca8g06318 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 420 IPR027417 -
Seca8g06318 443 PRINTS Kinesin heavy chain signature 164 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 PRINTS Kinesin heavy chain signature 370 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 PRINTS Kinesin heavy chain signature 289 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 Gene3D Kinesin motor domain 44 422 IPR036961 -
Seca8g06318 443 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 48 422 - -
Seca8g06318 443 MobiDBLite consensus disorder prediction 11 39 - -
Seca8g06318 443 Coils Coil 54 84 - -
Seca8g06318 443 SMART kinesin_4 93 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 MobiDBLite consensus disorder prediction 1 41 - -
Seca8g06318 443 Pfam Kinesin motor domain 122 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g06318 443 ProSiteProfiles Kinesin motor domain profile. 95 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06318 Seca-Chr8 157477703 157481549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06318 82 420 Calmodulin-binding Proteins AT5G65930 40.988 7.77e-74 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06318 - - gmx:100785581 755.747