Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06289 ATGGCGGATTCTTCAAGCAACCCAAAGGAGCAGAAGACGCGCCTTTACCATCCATACCAAGACCTCAACGTTCCGATCCAGAAACTCTACAACCTCCCTACCTCGCCGGAGCACCTCTTCCCTGAAGAAGCCGCCAGGACGCACCGCTCATGGGGCGACAACCTCCAGTACTACACCGGCTTCGGCTACCTCTCCGGCGCCATCATCGGCGGCGCCAAGGGGACCGTCGAGGGTCTCAGGGCTGCCGAGTCCGGTGACTCGCTCAAGCTCCGACTCAACCGAGTTCTGAACTCGGGAGGTCAGGGAGGTCGCAGGCTCGGAAACTCGCTCGGAGTGTTGGGCTTGATCTTTGCGGGTTTGGAGAGCGCGATGATCCACTTCAGGGGCAGGGATGACTTGGTGAACAGCGCCGTCGCCGGACTTGGCACCGGAGCGCTTTACAGGGCGGCGGCTGGGCCGCGATCGGCTGCTATTGCAGGCGCCATCGGAGGAATCGCCGCGGCGGCCACGGTTGCCGGGAAACAAGCTTTGAAACGATATGTGCCGATATAA 552 0.6141 MADSSSNPKEQKTRLYHPYQDLNVPIQKLYNLPTSPEHLFPEEAARTHRSWGDNLQYYTGFGYLSGAIIGGAKGTVEGLRAAESGDSLKLRLNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHFRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAATVAGKQALKRYVPI. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06289 183 PANTHER TIM23 25 170 IPR045238 GO:0022857
Seca8g06289 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06289 Seca-Chr8 157086607 157087158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06289 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 56.742 1.07e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06289 K17794 - gmx:100803835 279.256