Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06233 ATGCTTCCGCCACCCCAGATTTCTGATCAGGAATTGGATGAAATTGCAAGGTTGGGTTATGCCAGTGACCTTGCAGGGAGTGAGGAACTTGCAGAAGGCAGTGGCGCAACACGCGCTCTTCTTGCTAATTATGCACAAACACCTGGCCGAGGAATGACTCCTTTACGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCCATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCAGACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAATCTGATGCTGACACCCTCTGCAACCCCTGGAGGTGCAGATCTCACTCCCAGAACTGGCATGACACCAGCAAGAAATGGTCCTTCTTTAAGCATGACGCCAAAGGGAACTCCTCTTAGGGATGAGCTACATATTAATGAGGACATGGATATGCATGACAGTGCTAAACTTGAGCTACAGAGACAGGCTGATATGAGAAGAAGTTTGCGCACTGGATTGGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGACAGTGATGCAACCAGTTCCAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTGCTGCATCATTGGAACTTATAAGAAATTCCTTGATGAGAGCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATTAGAAGGGAGCTTCTAACTTTGCTGGAGCATGACAATGCTAAGTATCCACTTGATGAGAATGTGAATAAGAAGAAAAAGAAATGA 939 0.4643 MLPPPQISDQELDEIARLGYASDLAGSEELAEGSGATRALLANYAQTPGRGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNLMLTPSATPGGADLTPRTGMTPARNGPSLSMTPKGTPLRDELHINEDMDMHDSAKLELQRQADMRRSLRTGLGSLPQPKNEYQTVMQPVPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADGDKSSFVPPTSIEQADEMIRRELLTLLEHDNAKYPLDENVNKKKKK. 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06233 312 Pfam pre-mRNA splicing factor component 111 309 IPR021786 -
Seca8g06233 312 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 312 IPR047242 GO:0000398|GO:0000974
Seca8g06233 312 MobiDBLite consensus disorder prediction 183 217 - -
Seca8g06233 312 MobiDBLite consensus disorder prediction 104 118 - -
Seca8g06233 312 MobiDBLite consensus disorder prediction 46 66 - -
Seca8g06233 312 MobiDBLite consensus disorder prediction 82 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06233 Seca-Chr8 156439666 156440925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06233 1 310 MYB-Related Transcription Factor Family AT1G09770 81.672 1.18e-163 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06233 K12860 - gmx:100801352 543.502