Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06185 ATGTTCCTAATTACTACTCCTTGGCTTTTCCTGGCTCTCCATGCCAATGCTGAAAGCTCCACATACATAGTTCACATGGACAAGTCCCTAATGCCTCAAGTCTTCACAAGCCATCAAGATTGGTACGAGTCCACCATTCATTCCACAAAGTTAACAACATCAAAATTAGTGTACACTTACAATCATGCCATGCATGGATTCAGTGCTGTGCTATCCTCAGATGAGTTGGAGACCCTAAAGAAAGTTCATGGCTTTGTCACAGCTTATCCTGACAAGTCTGCCACCATAGACACCACTCACACCTTTGAGTTTCTCTCACTCAACCCCTCCATTGGGCTATGGAATGCATCAAATTTAGGAGAGGATGTCATTGTTGGTGTAATTGACTCTGGTGTCTGGCCTGAGAGTGACAGCTTTAAAGACCATGGCATGACTAACAAAATCCCATCCAAATGGAAAGGAACATGTGAGGCAGGACAAGATTTCAACACCTCCATGTGCAACTTGAAATTAATTGGTGCTAGATATTTCAACAAGGGTGTGATTGCAGCAAATCCTAAAGTCAAAATCAGCATGAACTCAGCTAGAGACACTCAAGGACATGGGAGCCACACATCTTCAACTGTTGCTGGAAACTATGTTAATGGTGCTTCTTTCTTTGGTTATGGCAAAGGGGTAGCAAGAGGAATTGCACCACAAGCTAGGCTTGCCATGTATAAGGTCCTTTGGGATGAAGGACGTGAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCTATTGCTGATGGGGTTGATGTCATTTCCATCTCTATGGGTTTTGACAGTGTTCCACTTTATGAAGACCCTGTAGCAATTGCTGCTTTTGCAGCAATGGAAAAAGGGGTAGTTGTTTCATCTTCTGCAGGAAATGAAGGTCCTAAACTTGGTACCTTGCACAATGGTATCCCTTGGGTCCTCACAGTGGCAGCAGGTACTATAGACCGTACATTTGGTAGTTTGATACTTGGAAATGGCCAAACCATTGTGGGTTGGACCTTGTTTCCTGCAAATGCCATAGTAGAAAATTTTCCACTTATTTACAACAAGACTCTATCAGCATGCAACTCAGTTAACCTGTTATCTGAAGCTGCTGGAGGAGGGATCATTATATGTGAGGCCTCAGAGTCAGTTTCTGTCTTAACCCAAATCAGTTCTATTACTGAGGCTAGTGTGGTAGGTGCTGTGTTTATCTCTGAGGATCCAAGATTAATTGAAACAGGAAGATTGTTCTCTCCAAGTATTGTAATCAATCCAAAAGATAGATCATCCCTAATCCACTATGCAAAAAGTGTTGAAAACCCCACTGCCAGCATCAAATTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTACAGCTTATTACACTTCAAGAGGTCCTTCACCTAGCTATCCAGGGGTCTTAAAGCCTGATGTAATGGCACCTGGCTCTAATGTTCTGGCTGCTTTTGTTCCAAATAAATCAGCAGCTAGAATTGGGACAAATGTGTTTTTATCAAGTGGTTACACTTTTCTTTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTCTTAAAAGGTGCACACCCTGATTGGAGTGCAGCTGCTATAAGGTCTGCATTAGTCACCACTGCTAATCCACTTGATAATACTCAAAATCCAATTTTGGACAATGGTAACCCATTTCAACATGCTTCACCTCTAGCCATGGGAGCTGGTGAGATTGATCCTAATAGAGCATTGGATCCAGGTTTGATATATGATGCCACCCCACAAGACTATGTTGACCTCCTTTGTGGTTTGGGATACACACACAACCAAATCTTAACTATTACAAGATCAAACTCCTATAACTGTGCAAACCCATCATTTGATCTTAACTACCCTTCATTTATAGCTTTGTATAGTAACAAAACAAGATCAATAGTCCACAAGTTTCGGAGGATTGTGACCAATGTTGGAGATGGTGCTGCTATGTATAGAGTCAAGGTGACACAACCCAAGGGGTCTGTGGTTACAGTGTCACCTGAGACACTAACATTCAGCTATAAGCATGAGAAACAGAGCTACTCTGTTATTATAAAGTACACGAGGCACAAGAAGGAAAATGTCTCATTTGGGGACCTTGTTTGGGTTGAAGAAGGTGGTTCACGCAGTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGAAATTGTTTAA 2232 0.4252 MFLITTPWLFLALHANAESSTYIVHMDKSLMPQVFTSHQDWYESTIHSTKLTTSKLVYTYNHAMHGFSAVLSSDELETLKKVHGFVTAYPDKSATIDTTHTFEFLSLNPSIGLWNASNLGEDVIVGVIDSGVWPESDSFKDHGMTNKIPSKWKGTCEAGQDFNTSMCNLKLIGARYFNKGVIAANPKVKISMNSARDTQGHGSHTSSTVAGNYVNGASFFGYGKGVARGIAPQARLAMYKVLWDEGREASDVLAGMDQAIADGVDVISISMGFDSVPLYEDPVAIAAFAAMEKGVVVSSSAGNEGPKLGTLHNGIPWVLTVAAGTIDRTFGSLILGNGQTIVGWTLFPANAIVENFPLIYNKTLSACNSVNLLSEAAGGGIIICEASESVSVLTQISSITEASVVGAVFISEDPRLIETGRLFSPSIVINPKDRSSLIHYAKSVENPTASIKFQQTFVGIKPAPATAYYTSRGPSPSYPGVLKPDVMAPGSNVLAAFVPNKSAARIGTNVFLSSGYTFLSGTSMACPHASGVAALLKGAHPDWSAAAIRSALVTTANPLDNTQNPILDNGNPFQHASPLAMGAGEIDPNRALDPGLIYDATPQDYVDLLCGLGYTHNQILTITRSNSYNCANPSFDLNYPSFIALYSNKTRSIVHKFRRIVTNVGDGAAMYRVKVTQPKGSVVTVSPETLTFSYKHEKQSYSVIIKYTRHKKENVSFGDLVWVEEGGSRSVRSPIVVAPSEIV. 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06185 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 11 96 IPR037045 -
Seca8g06185 743 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Seca8g06185 743 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Seca8g06185 743 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Seca8g06185 743 SUPERFAMILY Subtilisin-like 97 596 IPR036852 GO:0004252|GO:0006508
Seca8g06185 743 Gene3D Peptidase S8/S53 domain 122 605 IPR036852 GO:0004252|GO:0006508
Seca8g06185 743 Pfam Subtilase family 120 564 IPR000209 GO:0006508|GO:0008236
Seca8g06185 743 SUPERFAMILY Protease propeptides/inhibitors 20 81 - -
Seca8g06185 743 ProSiteProfiles Serine proteases, subtilase domain profile. 101 592 - -
Seca8g06185 743 Pfam Peptidase inhibitor I9 21 94 IPR010259 -
Seca8g06185 743 FunFam Subtilisin-like protease SBT1.9 11 97 - -
Seca8g06185 743 FunFam Subtilisin-like protease SBT1.5 122 335 - -
Seca8g06185 743 Pfam Fibronectin type-III domain 636 737 IPR041469 -
Seca8g06185 743 CDD Peptidases_S8_3 95 557 IPR034197 -
Seca8g06185 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 737 IPR045051 -
Seca8g06185 743 Gene3D - 327 458 - -
Seca8g06185 743 CDD PA_subtilisin_like 332 451 - -
Seca8g06185 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Seca8g06185 743 Gene3D - 609 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06185 Seca-Chr8 155857663 155859921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06185 10 742 Subtilisin-like Serine Gene Family AT5G67090 41.931 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06185 - - gmx:100806072 1237.63