Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06166 ATGGCATCAATGAACTGGTTAGGTTTCTCTCTCTCCCCTCAACAACCTAACGAAGACAACAACCACTCCCAAACGGTGGCGCCTCGCCTCGGCTTCAACTCCGACGGAATCTCCGGCGAGTGCTTTGATCTCACTTCCGACTCCACCGATCAATCACTCAACCTCCCTCCACCTTTCGGCATATTTGAAGCACTCAATCGAAACAACACTCCTCTAGATTGGAACACAAAGGGTTTAGAAAGCAGCAACGGAGAGGATAACTATAACATGCTATTGAGCAGTAACCAAAACCAGCCGAAGCTCGAGAACTTTCTCGGCCACCACTCTTTTAGTGGTGACCATGGCACATACAACTCAGCTTCGTCACTAAAACTTCCACCTCAGCCATCGGAAGAACCACCGCCATCCTGCGACGGTGGTGGAAGTCCGAAAAACAGCATCGGGCTTTCCATGATAAAGACTTGGTTGAGAAACCAACCGTCACAGACAGATGCTGTTGCAAATATATCGCTTTCTATGAGTACAGCGTCACAGTCAAGCACAATAGCACTGCCTCTCCTCACAGCGAACGTGGAAGGAGAGAATTCTTCTTCGGATAGCAAGCAGCAAGGCGTTGATTGCCAAAGTGGAGGAGCTATTGTTGAAACTGTGCCTAGAAAGTCGGTTGACACTTTTGGACAGAGAACTTCCATTTACCGTGGCGTAACCAGGCATAGGTGGACGGGTAGATATGAAGCTCATCTCTGGGATAATAGTTGTAGAAGAGAAGGCCAAACTCGCAAAGGAAGGCAAGGTACAATACAACTACCAACTATCATCTCTTCTTTTAGTTTTTTTTTTTTTCCTTAA 849 0.4711 MASMNWLGFSLSPQQPNEDNNHSQTVAPRLGFNSDGISGECFDLTSDSTDQSLNLPPPFGIFEALNRNNTPLDWNTKGLESSNGEDNYNMLLSSNQNQPKLENFLGHHSFSGDHGTYNSASSLKLPPQPSEEPPPSCDGGGSPKNSIGLSMIKTWLRNQPSQTDAVANISLSMSTASQSSTIALPLLTANVEGENSSSDSKQQGVDCQSGGAIVETVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGTIQLPTIISSFSFFFFP. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06166 282 Gene3D AP2/ERF domain 231 269 IPR036955 GO:0003700|GO:0006355
Seca8g06166 282 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 95 265 - -
Seca8g06166 282 MobiDBLite consensus disorder prediction 1 30 - -
Seca8g06166 282 MobiDBLite consensus disorder prediction 115 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06166 Seca-Chr8 155650576 155651784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06166 99 264 AP2-EREBP Transcription Factor Family AT5G17430 43.275 2.40e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06166 K09285 - jre:108986097 287.345