Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06135 ATGGGTTCGGGAAACAGAACCTACTCTGTTAATCCCGCCGATTACAAGCTTCTAGAAGAAGTCGGTTACGGCGCCAGCGCCACCGTGTACCGCGCAATCTTCCTTCCTCACAACGAAGAGGTGGCGGTGAAGTGCCTCGATCTGGATCGCTGCAACGCCAATTTGGATGACATAAGGAAGGAAGCGCAGCTTATGAGCTTGATCGACCACAAGAACCTCGTTAGGTCCTTCTGTTCCTTCGTTGTTCAACAAAAGCTTTGGGTTGTTATGCCTTTCATGGCGCAGGGTTCTTGCTTGCACCTCATGAAGGCTGCTTATCCTGATGGATTCGAAGAAGACGCCATCGGATCCATCCTCAAGGAAACTCTCAAAGCGTTGGAGTATCTCCATCGACACGGTCACATTCATCGCGATGTTAAGGCTGGTAATATTTTGCTCGATTCCAACGGCGAAGTCAAACTCGCTGACTTTGGTGTTTCCGCTTCCATGTTTGATACCGGCGATCGTCAGCGTTCTAGAAACACTTTCGTCGGAACTCCTTGCTGGATGGCGCCGGAGGTACTGCAACCTGGAACTGGTTATAATTTCAAGGCTGATGTTTGGTCTTTTGGAATTACGGCACTGGAGTTAGCTCATGGTCATGCTCCTTTCTCCAAATACCCTCCTATGAAGGTTTTGCTAATGACCATACAGAATGCCCCTCCAGGACTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCAACTGTGGAGAAGTTACTGAAACACTCTTTCTTCAAACAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAATTGTTTGCTGATTTACCACCTCTTTGGAATCGTGTGAAAACTCTCCAGATTAAAGATGCAGCTCAACTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATCAGCGAGGAGTCAGTGCGTGGAACTTTGATATTGATGACTTGAAAGCTCAAGCTTCATTGATGCAAGACGACGATGATATTTCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTATAAGGATACAACAGATTCCCAATTTAGTGTGGGCAAAAAGGATTCAGATAACTTACAACAAGATGAGTTCACATTACAAGATGGTGGTAATGACATACCTCAGAGTGAGAAGAGAAATGGATCAATTGCTGAAGCAACACCATCTACCTTAGAGAAGGATATGGGAACAAGCAAGGTTAAAAATCAATCATTGAAAATTGGTAAAACCCAAAGTGGGCCGCTGGTGCCGGGCACAGTGCTTGGTCATTCTTTTCAAGAAAGAGGGCGCACATTTGAAAGGTTTGAGAATGAAAATCAGTCATTAGGTGAGAAAAGTAATCGTGATATGCGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCATCGGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTCAGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGGTTCTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATCCCAGTAAGTTCAGTTTCACGCCGATCTTCACAGGTTTGTCGATGA 1674 0.4397 MGSGNRTYSVNPADYKLLEEVGYGASATVYRAIFLPHNEEVAVKCLDLDRCNANLDDIRKEAQLMSLIDHKNLVRSFCSFVVQQKLWVVMPFMAQGSCLHLMKAAYPDGFEEDAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGEVKLADFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKTLQIKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLMQDDDDISEMREEDENKFFSSYKDTTDSQFSVGKKDSDNLQQDEFTLQDGGNDIPQSEKRNGSIAEATPSTLEKDMGTSKVKNQSLKIGKTQSGPLVPGTVLGHSFQERGRTFERFENENQSLGEKSNRDMRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQVCR. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06135 557 Gene3D Transferase(Phosphotransferase) domain 1 96 328 - -
Seca8g06135 557 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06135 557 MobiDBLite consensus disorder prediction 375 428 - -
Seca8g06135 557 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06135 557 FunFam Serine/threonine-protein kinase BLUS1 4 92 - -
Seca8g06135 557 SUPERFAMILY Protein kinase-like (PK-like) 14 330 IPR011009 -
Seca8g06135 557 MobiDBLite consensus disorder prediction 492 509 - -
Seca8g06135 557 CDD STKc_OSR1_SPAK 14 276 - -
Seca8g06135 557 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Seca8g06135 557 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 545 IPR047173 GO:0043539
Seca8g06135 557 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 96 326 - -
Seca8g06135 557 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Seca8g06135 557 MobiDBLite consensus disorder prediction 465 519 - -
Seca8g06135 557 MobiDBLite consensus disorder prediction 392 428 - -
Seca8g06135 557 MobiDBLite consensus disorder prediction 465 481 - -
Seca8g06135 557 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06135 Seca-Chr8 155256546 155264457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06135 8 555 MAP Kinase Kinase Kinase Kinase AT4G10730 68.592 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Seca8g06135 Pkinase 8.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06135 - - gmx:100811264 998.423