Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06134 ATGTTGTGTGTCCCTTTCAGATATCATTATCAATCTTCCAGTTGCCACAATAAAAAGTCCTCCTCGCCGGCTCCCAAATCTAAGAAAAGAGTAGAACCAATTCAGATGGCCAATCTTTTAAGCCATAACAGGTTCTTGGTGTGTCTTTTGATTACACTGGTCCAAATCCAAACCAAGGTGCTCTGCTACCAATACAAAGTTGGAGATCTAGATTCTTGGGGGATACCCACCTCATCAAATCCACAAGTCTATGTCAAATGGTCCAAATATCACAATCTCACGCTTGGAGACTCACTTTTGTTTCTATACCCACCAAGTCAAGATTCACTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAAACCCCATATTGTATATGAACAATGGAAACTCTTTGTTTAACATTACATCACATGGGAACTTCTACTTCACCAGTGGAGAGCCTGGTCATTGCCAAAAAAATCAGAAGCTTCATATATCTGTGGGTGGAGGAGGAATGGAAAATGAGGATGCAGCACCTGGTCCAAGTTCATTGTCTGCATATGCACCTTCTTATCCCACAGTATTTGGCAACATTCCAATTTCTCCTTCTTCTTCAGCCTCACCTAAGCTAACTTCAACTTTTCAAGTCCTCACCATTGGATCTGTGATATGTGCACTGTTCTCTGCCTTAATGTAA 690 0.4116 MLCVPFRYHYQSSSCHNKKSSSPAPKSKKRVEPIQMANLLSHNRFLVCLLITLVQIQTKVLCYQYKVGDLDSWGIPTSSNPQVYVKWSKYHNLTLGDSLLFLYPPSQDSLIQVTEESYKSCNLKNPILYMNNGNSLFNITSHGNFYFTSGEPGHCQKNQKLHISVGGGGMENEDAAPGPSSLSAYAPSYPTVFGNIPISPSSSASPKLTSTFQVLTIGSVICALFSALM. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06134 229 CDD OsENODL1_like 63 165 IPR041846 -
Seca8g06134 229 FunFam Early nodulin-like protein 1 62 169 - -
Seca8g06134 229 SUPERFAMILY Cupredoxins 62 165 IPR008972 -
Seca8g06134 229 Gene3D - 63 178 IPR008972 -
Seca8g06134 229 ProSiteProfiles Phytocyanin domain profile. 63 167 IPR003245 GO:0009055
Seca8g06134 229 PANTHER BLUE COPPER PROTEIN 61 190 IPR039391 GO:0009055
Seca8g06134 229 Pfam Plastocyanin-like domain 82 158 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06134 Seca-Chr8 155253780 155255253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06134 40 229 Phytocyanin Superfamily AT1G64640 54.167 4.18e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06134 - - gmx:100527517 296.589