Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06063 ATGATCATGGGCTTTGTGCAGGACTTCAATTTGAGAATTCTTGTGAAGTTGGAGTCTTCTCTAAACTCACCAATGCCTATTGTTTGGTTGGTATTGGAGGCTCTGAAAACTTCTACAGATGTTATCCCTGTGGTCAAAACCTCCATTGGTGGCACTCGTATTGTTGGTCGTCATTGTATTGGAAACAAGAACGGGCTTCTCTTGCCCCACACCACCGCAGACCAAGAACTTCAACATTTGAGAAACAGTCTATCAGATCAAGTTGTTGTTCAGCGCATAGAAGAAAGATTATGTGCTCTTAGGTTACTTAAACTTTTAGGTTACTTAAATTCTGAAACCGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACTGTTGCTGGTAATATTCTTGTCGGCAGTTACTGTGCATTCTCCAACAGAGGTGGTTTGGTCCACCCTCATACTTCCATTGAGGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTTGCCGGGACTGTCAATCGTGGTAGTGAAGTAATAGCTGCTGGCTTGACAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTATCTGTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCCCAGCCTAGTGCCATTGTGGATGAGATGAGGAAATCGCTCATTGATAGCTATGTCTGA 702 0.4345 MIMGFVQDFNLRILVKLESSLNSPMPIVWLVLEALKTSTDVIPVVKTSIGGTRIVGRHCIGNKNGLLLPHTTADQELQHLRNSLSDQVVVQRIEERLCALRLLKLLGYLNSETEEMIADVLGVEVFRQTVAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06063 233 SMART eIF6neu2 1 192 IPR002769 GO:0042256|GO:0043022
Seca8g06063 233 Pfam eIF-6 family 35 191 IPR002769 GO:0042256|GO:0043022
Seca8g06063 233 SUPERFAMILY Pentein 39 212 - -
Seca8g06063 233 Hamap Translation initiation factor 6 [eif6]. 1 233 IPR002769 GO:0042256|GO:0043022
Seca8g06063 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 39 232 IPR002769 GO:0042256|GO:0043022
Seca8g06063 233 Gene3D - 30 213 - -
Seca8g06063 233 NCBIfam translation initiation factor IF-6 36 212 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06063 Seca-Chr8 154269932 154271959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06063 40 233 Eukaryotic Initiation Factors Gene Family AT3G55620 80.693 3.42e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06063 K03264 - cit:102614879 323.939