Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06061 ATGAGAAATAAAAAAAACACAGCAGCAAGTGATTTGAGGGTTTATTGCGACAAAAGGATAGCAGTGCTGCCGCAGAGCTTTGCTACGTATCGTCGCCTCCACCTCGCAACCATGATCATTCCGGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTATGCTACGCAAAGAAGGATTACAATTTAGCAAAGCACCCAGATATCGATGTGCCAAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCTAGGGAGTACGTTAGAGAGACCTTTGCTTGGATGAACTACTACTGGTTCCTCACAAACGAAGGCATTGAGTTCCTCAGAGGATACCTTAATCTTCCTTCTGAAATTGTTCCTGCTACTTTGAAGAAACAAGCCAAGCCCCCTGGTAGATCATTCGGTGGTCCACCCGGTGATCGCCCTAGGTACTTTACCCCTTCTTCTCAGATTGTGTTATGTTCTGTTTTTGATTCTGTGGCTGATTGCACGTTCGACAATTTGAACAGGGGTCCACCACGCTTTGAAGGAGAACGTAGATTTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACCGGGTGGTGACTTTGGAGGAGACAAGGGAGGAGCTCCTGCTGACTACAGACCCTCCTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGGGCTCCAACCAGCTCAAATCTTCCCTAA 732 0.4877 MRNKKNTAASDLRVYCDKRIAVLPQSFATYRRLHLATMIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNEGIEFLRGYLNLPSEIVPATLKKQAKPPGRSFGGPPGDRPRYFTPSSQIVLCSVFDSVADCTFDNLNRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNLP. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06061 243 MobiDBLite consensus disorder prediction 173 243 - -
Seca8g06061 243 FunFam 40S ribosomal protein S10 38 141 - -
Seca8g06061 243 Gene3D - 38 140 IPR036388 -
Seca8g06061 243 PANTHER 40S RIBOSOMAL PROTEIN S10 38 237 IPR037447 -
Seca8g06061 243 MobiDBLite consensus disorder prediction 177 192 - -
Seca8g06061 243 Pfam Plectin/S10 domain 40 131 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06061 Seca-Chr8 154248985 154250960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06061 38 243 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 65.700 2.72e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06061 K02947 K09422 gmx:100500445 254.988