Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06056 ATGCCCTCTAATTATGAATCTGACAATGATGCCGATAGTTCTGAAGAGGGCATTGTTGATGACGAAGCATTGGCTCAAAATTCCTCCATAGTTATGACAGAGTCTAATACTGCCAGTGTTGAGAACTGCATTGTTAGTGACTTGGAGAGTTCTTCGGTTACTGAGGGAGATACTTCAATGCTAGAGATGATTGTGATAAAAGATGTCAGCAGTGGAGCTGAGGTATTTAATACTTACGGGTTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGACAATTCCTATGATATTGTTAACATTGATTTGGAACTGGTACTTCAATGGTGTTCTTCTTTGTTTTCTGACCGCCACAGTAGAGCAAGAATCTCCCTTTGGAGAAGACTAGGCTATTCTGCATGTGGCTACCAAAACTCAGAATATTTTGAGATCTCATTTGATGGAGAACCACAGATTGAACTCCTCATTTTATTATACATCATGTTATTACCAGATAATGCCTACCATAAGTTAGACCTATCAGTATCAATTGCTGGAAATTGTCATGAATCAAGTGAAACTACTCTTTTGAATGATAATATATTTCTAAAGAAAGCATCTGATATGAGCAAGAAATCCTTGATGACTAAAGAAGTTTGTGATGCTCTGTTGTCACTCGCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCAATAGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTGGAGAGAAAAAGCTGTATCATTCTTTGGTGCTGCGCATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCTCAGTCATATAAATTCACTGATCATAGTTCTGCGAGGAAGAAGTTGAAAAGGACAACAAAGAAAGATAGTTGA 900 0.3756 MPSNYESDNDADSSEEGIVDDEALAQNSSIVMTESNTASVENCIVSDLESSSVTEGDTSMLEMIVIKDVSSGAEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSDRHSRARISLWRRLGYSACGYQNSEYFEISFDGEPQIELLILLYIMLLPDNAYHKLDLSVSIAGNCHESSETTLLNDNIFLKKASDMSKKSLMTKEVCDALLSLADMRESLYGLKSIEDDIEALGRCSLVGEKKLYHSLVLRISERKILQKLRNYASQSYKFTDHSSARKKLKRTTKKDS. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06056 299 SUPERFAMILY SET domain 51 99 IPR046341 -
Seca8g06056 299 Gene3D set domain protein methyltransferase, domain 1 9 94 - -
Seca8g06056 299 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 51 244 - -
Seca8g06056 299 Gene3D - 96 288 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06056 Seca-Chr8 154186264 154190611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06056 50 297 NAC Transcription Factor Family AT3G56570 55.686 2.99e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06056 - - gmx:100794971 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06056 8 154186264 154190611 Seca8g06056 8 154186264 154190611 ECH