Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06053 ATGCTGTATAAATCATCAATGAAGTCTTTGAAGATGGTGATGGCAAATTTGCTGACAGTGTTTTTGCTAATTGAGGTGATTGCATGCGGTTTCGGTGGTTTTGGATATGGATCAGATGGTGGCTTAAACATGAACTACTACTTGATGAGTTGCCCTTTTGTTGAACCTGTTGTTAAGAACATTGTCAACAGAGCTTTGCAGGATGATCCTACCCTCGCTGCTGCTCTTATCAGAATGCACTTCCATGACTGCTTCATAGAGGGATGTGATGGGTCAATTCTGCTTGACTCCACTAAGGATAATACAGCAGAAAAGGATTCACCAGCAAATTTGAGCCTGAGAGGTTACGAAATCATAGACAGTATCAAAGAAGAGCTTGAAAGACAATGCCCTGGCGTGGTTTCATGTGCTGATATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCTGGAGGACCAGTGTATGACATACCCAAAGGAAGAAAGGATGGAAGAAGATCCAAAATTCAGGACACTATCAATTTGCCATTCCCCACCTTCAATGCCTCTGAGCTCATTAGGCTGTTTGGCCAACATGGTTTTTCTGCACAAGAGATGGTGGCTCTCTCTGGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAGCCAAGTGGACCCAACTTTGGATTCAGAATTTGCCAAGACACTGTCAAAAACATGCAGTGCTGGTGACAAGGCAGAGCAACCATTTGATGCCACAAAGAACGATTTTGATAACGTTTACTTCAACGCTCTATTAAGGAAAAATGGGTTGCTGACATCAGACCAAACTCTGTACACTAGCCCCAAAACCAGGAACTTTGTGAATGCTTATGCATTTAACCAAGCCATGTTCTTCCTTGATTTCCAACAAGCAATGGTGAAGATGGGCTTGCTTGATGTCAAAGATAATTCCAATGGAGAAGTGCGAGAAAATTGCCGCAAAATAAACTAA 993 0.428 MLYKSSMKSLKMVMANLLTVFLLIEVIACGFGGFGYGSDGGLNMNYYLMSCPFVEPVVKNIVNRALQDDPTLAAALIRMHFHDCFIEGCDGSILLDSTKDNTAEKDSPANLSLRGYEIIDSIKEELERQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIQDTINLPFPTFNASELIRLFGQHGFSAQEMVALSGAHTLGVARCASFKNRLSQVDPTLDSEFAKTLSKTCSAGDKAEQPFDATKNDFDNVYFNALLRKNGLLTSDQTLYTSPKTRNFVNAYAFNQAMFFLDFQQAMVKMGLLDVKDNSNGEVRENCRKIN. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06053 330 Gene3D Peroxidase, domain 2 177 309 - -
Seca8g06053 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Seca8g06053 330 CDD secretory_peroxidase 42 329 IPR033905 GO:0004601|GO:0042744
Seca8g06053 330 SUPERFAMILY Heme-dependent peroxidases 41 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 ProSiteProfiles Plant heme peroxidase family profile. 41 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 PANTHER - 31 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 FunFam Peroxidase 45 183 - -
Seca8g06053 330 Pfam Peroxidase 58 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g06053 330 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Seca8g06053 330 FunFam Peroxidase 177 309 - -
Seca8g06053 330 Gene3D - 45 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06053 Seca-Chr8 154160729 154163409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06053 11 330 Peroxidase AT4G33420 71.875 7.68e-168 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06053 K00430 - gmx:100776019 582.022