Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06051 ATGGGTTCAATTATTGCGAATAGCCAAGAAGCAATTGAACTCTTCCAAGGCCAAACTTTGTTGTACATGAACATGGCTGGCTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTCCAGACATAATACACAACTATGCCAAACCCATCACTCTTCCTGAATTGGTGTCAACTCTTCAAGTTCCACCATCCAGGGCTAGTATTGTGCAGAGATTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAAGGTCATGAAGCATATGCTCTGACCCCAGCATCAAAGCTTCTAATTTCTAAGGCATGTAGTGGCCCTTGTTTATCTCCAATGATTAAGATGGCTAGTGATCCAGTTCTGATGAATGCATACCACCACTTGGGGGACTGGGTTTGTGGGGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCCTTTTGGGAATTTCTTGGGGAAAATCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGCGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGTAGTTCAGTCTTTGAGGGGCTTGATTCCATTGTGGATGTTGGTGGTGGAATTGGAACCACGGCTAAAATTATATGTGAGGCATTTCCTAAGTTGAAATGTGTTGTATTTGACCTTCCTCAGGTTGTGGCTAACTTGGCAGGTAGCAATAATTTGAGTTATGTTGGCGGGGATATGTTCAAATCTATCCCTCAAGCTGATGCAATTCTACTAAAGTGGATTCTACATGATTATACAGATGTAATTTGCATAAAGATTTTGAAAAGCTGTAAAGATTCTCTTTCAAGGAATGGCAAAAGAGGGAAAGTGATTATCATGGATATAGTTATAAATGAAAAGGAAGACGACCAAGATATGACTCAAACAAAGCTTTCTATGGATATAATCATGATGAATGTTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGCAACTCTTCATTGAGGCAGGGTTCAAACAATATAAAATATTTCCCTTCTTTGGCTTTAAATCTCTTATTGAACTCTATCCTTAG 1077 0.3946 MGSIIANSQEAIELFQGQTLLYMNMAGFLKSMCLKWAVQQGIPDIIHNYAKPITLPELVSTLQVPPSRASIVQRFMRFLAHNGIFAIIHESKEGHEAYALTPASKLLISKACSGPCLSPMIKMASDPVLMNAYHHLGDWVCGEIPTLYEAALGKPFWEFLGENPAYMSLFNEAMAADSQMVDLALKNCSSVFEGLDSIVDVGGGIGTTAKIICEAFPKLKCVVFDLPQVVANLAGSNNLSYVGGDMFKSIPQADAILLKWILHDYTDVICIKILKSCKDSLSRNGKRGKVIIMDIVINEKEDDQDMTQTKLSMDIIMMNVNGKERTEKEWKQLFIEAGFKQYKIFPFFGFKSLIELYP. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06051 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 358 IPR016461 GO:0008168
Seca8g06051 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Seca8g06051 358 SUPERFAMILY "Winged helix" DNA-binding domain 13 109 IPR036390 -
Seca8g06051 358 Gene3D - 3 107 IPR036388 -
Seca8g06051 358 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Seca8g06051 358 PANTHER O-METHYLTRANSFERASE 18 343 IPR016461 GO:0008168
Seca8g06051 358 PIRSF O-mtase 3 358 IPR016461 GO:0008168
Seca8g06051 358 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
Seca8g06051 358 Gene3D Vaccinia Virus protein VP39 113 358 IPR029063 -
Seca8g06051 358 FunFam Coniferyl alcohol 9-O-methyltransferase 5 107 - -
Seca8g06051 358 FunFam O-methyltransferase ZRP4 112 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06051 Seca-Chr8 154130980 154132570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06051 1 356 Monolignol Biosynthesis Gene Families AT5G54160 34.153 5.72e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06051 K22588 K13262 gmx:100818947 513.072