Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06049 ATGGCTTCAATTGAGAATAGCCAAGAAGCAATTGAACTTTCTCAAGGCCAAGCTTTGTTGTACATGAACATGTTTGGTTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTGCAGACATAATACACAACCATGCCAAACCCATCACTCTTCCTGAATTGGTCTCAACTCTTCAAGTTCCACCATCCAGGGCTAGTTTTGTGCAGCGACTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAGGATCATGAAGCATATGCTCTGACTCCAGCATCAAAGCTTCTTTCAAAGGCATGTAGTGACCATTGTTTGTCTCCAATGGTTAAGATGTCTACTGATCCAGTTCTCATGAATAAGTTCCACCAATTGGGGGACTGGATTTGTGGGGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCCGTGTGGGAATTTCTTGAGGAAAACCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGGGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGCATTTCAGTCTTTGAGGGGCTAGATTCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTAAAATTATCTCTGAGGCATTCCCTAAGTTGAATTGTGTTGTATTTGACCTTCCACAGGTTGTGGCTAACTTGTCAGGTAACAATAATTTGAGTTATGTTGGTGGGGACATGTTCCAATTTATCCCTCAAGCCGATGCAATTCTAGTAAAGTGGATTCTACATGATTGGACGGATGAAATTTGCATAAAGATTCTGAAAAACTGTAAAGATTCCGTTTCAAGGAATGGCAAGAGAGGGAAAGTGATTATCATGGATATAATAATAAATGAAAAAGAAGATGACCAAGATATGACTCAAACAAAACTTTGTATGGATATAATCATGATGGGTATTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGCAGCTCTTCATTGAGGCAGGGTTCAAAGACTATAAAATATTTCCCTTATTTGGCTTTAGATCTCTTATTGAACTCTATCCTACATTGTTATGA 1080 0.3963 MASIENSQEAIELSQGQALLYMNMFGFLKSMCLKWAVQQGIADIIHNHAKPITLPELVSTLQVPPSRASFVQRLMRFLAHNGIFAIIHESKEDHEAYALTPASKLLSKACSDHCLSPMVKMSTDPVLMNKFHQLGDWICGEIPTLYEAALGKPVWEFLEENPAYMSLFNEAMAGDSQMVDLALKNCISVFEGLDSIVDVGGGTGTTAKIISEAFPKLNCVVFDLPQVVANLSGNNNLSYVGGDMFQFIPQADAILVKWILHDWTDEICIKILKNCKDSVSRNGKRGKVIIMDIIINEKEDDQDMTQTKLCMDIIMMGINGKERTEKEWKQLFIEAGFKDYKIFPLFGFRSLIELYPTLL. 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06049 359 Gene3D - 1 106 IPR036388 -
Seca8g06049 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Seca8g06049 359 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Seca8g06049 359 PANTHER O-METHYLTRANSFERASE 20 341 IPR016461 GO:0008168
Seca8g06049 359 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Seca8g06049 359 FunFam O-methyltransferase ZRP4 109 356 - -
Seca8g06049 359 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Seca8g06049 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 356 IPR016461 GO:0008168
Seca8g06049 359 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Seca8g06049 359 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Seca8g06049 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 108 IPR036390 -
Seca8g06049 359 CDD AdoMet_MTases 196 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06049 Seca-Chr8 154101162 154102821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06049 31 358 Monolignol Biosynthesis Gene Families AT5G54160 34.821 5.99e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06049 K22588 - gmx:100818947 515.768