Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06045 ATGGTGTTCAATAAGGATGAGGCCATCAGAGCTAGAGAAATCGCTGAGAACAAGTTTGCTGCAAAGGATATTTTGGGAGCAATGGAGTTTGCTTTGAGGGCCCAGAGGTTATTTCCTTATCTTGAGGGCATTTCTCAAATGATAACAACATTTCATGTGTATATTTGTGCTACCAATGAAATAAATGGTGAAGTTGATTGGTATGGTATACTTGGTGTGGATCCCCTTGCTGATGATGACACAATGAGGAAACAATATAGAAAGATGACTCATGTGCTTCACCCTGATAATAACAAGTCCGTTGGTGCAGATGGGGCCTTTAAACTGATTTCAGATGCATGGAGTTTACTATCAGATGAGGCTAAAAGGGTAGCATATGATGAGAAGATAAATGCAAAATCAGCTCAAACAGGGGCTGATGGAAGTTACAGTTTTACTGAGACTACTGCTTCAAATGCAAGGACTCAGGGGAAAACTGCTGATGGCATGAAAGTTGTGAAGGACGAAGAAATGGTTAACAATGAGGATACTATAATTAAAGAAACAACAGATAACATGAAAGAAGCTGATGGTGAGGAAATGAACAAAGATATGGGAGCATCTGGCGAAGAGAAGAAGGAAATTGAAACTATGGAAGAGGGGAAAAAATGGTAG 654 0.3976 MVFNKDEAIRAREIAENKFAAKDILGAMEFALRAQRLFPYLEGISQMITTFHVYICATNEINGEVDWYGILGVDPLADDDTMRKQYRKMTHVLHPDNNKSVGADGAFKLISDAWSLLSDEAKRVAYDEKINAKSAQTGADGSYSFTETTASNARTQGKTADGMKVVKDEEMVNNEDTIIKETTDNMKEADGEEMNKDMGASGEEKKEIETMEEGKKW. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06045 217 Gene3D DnaJ domain 63 212 IPR036869 -
Seca8g06045 217 Pfam DnaJ domain 66 127 IPR001623 -
Seca8g06045 217 MobiDBLite consensus disorder prediction 138 158 - -
Seca8g06045 217 SUPERFAMILY Chaperone J-domain 53 129 IPR036869 -
Seca8g06045 217 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca8g06045 217 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca8g06045 217 PRINTS DnaJ domain signature 122 141 IPR001623 -
Seca8g06045 217 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca8g06045 217 MobiDBLite consensus disorder prediction 138 159 - -
Seca8g06045 217 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Seca8g06045 217 CDD DnaJ 66 119 IPR001623 -
Seca8g06045 217 PANTHER BNAC03G44070D PROTEIN 1 142 - -
Seca8g06045 217 MobiDBLite consensus disorder prediction 178 217 - -
Seca8g06045 217 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca8g06045 217 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06045 Seca-Chr8 154076542 154078188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06045 4 131 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.313 1.51e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06045 - - ahf:112751648 217.624