Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06039 ATGCTGATTTTTTCTGTGGAATCAATCCAGACCGGAGCTTTGCTTCTTGATGGTGGTACGTTGAACTACTTTGGGAAACCTATCCCAATCAATCTTATCATTGCTGTCGTTGCTGAGATAGTTCTTCTGGGTGGAGCAGAGTACTACAGAATTATTAATGGCCTGGATTTTGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCCTTGGGGCTAGCAAATGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGAAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGAGAAGGTCCTGTTGAGAACTTCACAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTGATTGCTAGCTCTGCTGAGAGGGCTCCAACTCTGTGA 426 0.4437 MLIFSVESIQTGALLLDGGTLNYFGKPIPINLIIAVVAEIVLLGGAEYYRIINGLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENFTKHLSDPFGNNLLTVIASSAERAPTL. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06039 141 FunFam Chlorophyll a-b binding protein, chloroplastic 5 141 - -
Seca8g06039 141 Gene3D Chlorophyll a/b binding protein domain 2 141 - -
Seca8g06039 141 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 132 IPR001344 GO:0009765|GO:0016020
Seca8g06039 141 Pfam Chlorophyll A-B binding protein 34 104 IPR022796 -
Seca8g06039 141 SUPERFAMILY Chlorophyll a-b binding protein 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06039 Seca-Chr8 154025098 154026483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06039 9 141 Chloroplast and Mitochondria Gene Families AT4G10340 87.218 2.11e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06039 K08916 - gmx:100806585 255.758