Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06031 ATGGAACAAGAAAATGTTTTAGATCATGGTGGGCCTTCAAATGATGTTGCAGCAAGCCCTAAATACAGTCAACTTCGAGATCAAACATCGATGATTATAAAAGATACCGTGGACAGCCAACCTGATTACTTTGAGCCAGTAGTTGGCATGTCATTTCATTCAGCGGAAGCCATTAAATCATTCTATCGCCAATATGCTACTAGAAAAGGATTCAGGATCATGATAAGAAACTCAAGAAAAGGGGCTGATGGCAAACTAAAATACTTCATCTTGGCATGTTCAAGAGAGGGGAATTATGTTTCGATGATACCCAATGACTTGAAGACATATCCCACAATAAAGAATAAATGTCCAGCGAGGATCACAGTGGCATTGAAAGATGGACTTTGGTACATTATGACAGTTCATACTGACCATTGTCATGACTTTAACCCTGGTAAGTCTATGTTGTTTAGTGGGAACAAAACCATGAGCATGCATGTGAAGAGAGCTATTCAGATAAATAATGAAGAAGGCATGAGGTTGAACAAGAGCTACCGTCCTCTTCTTTATGATGTGGAAGGATATGAAAATTTGTCATTTGTTGAACAAGATGTCGGAAATGTTGTGGGGAGGGAAAGACGCACACTCGGGAAGGAAGGTGATGGTAAGGCACTATTAGCATATTTTGCACAAATGCAGCAACACAATAGAAACTTCTTTTATGAAGTTGATTTGGATGATGACTTCCATGTGAACAATGTATTTTGGGCTGATGCAAGAAGTAGGGCTACCTATGAATACTTTGGAGACATTGTCTTTTTTGACACAACATACTTGGCAAATAAGTATGAAATGCCATTTGCACTATTTGTTGGGGTCAATCATCATGGGCAACTGATTTTGCTAGGGTGTGGCTTGCTATCTGCTGAAGACACTGAGTCATTTGCATGGCTGTTTCAATCATGGCTTCGATGTATGTCAGGAAAGGCCCCGGAAGGTATTATCACTGACCAATGCAAGGCAATGCAAAATGCTATTGAGTTAGTGTTTCCTAATGCTCGGCACAGGTGGTGCCTATGGCATATAATGAAGAAAATGCCTAAAAAGTTGATAGGTCTTCCTGAGTATAAGAATATAATGAATGCAATGAACATTGCAGTTTATGATTCATTGACCGTGGATGAATTTGAAAGTATGTGGAGTAGTTTCATTGAAAAATTTGGTCTAGGAGACAACGAATGGTTAAATGGACTATACAAAGAACAATCAAAATGGGTGCCATGTTTTATAAAGCAAGATTTTTGGGCTGGAATGTCAACCACACAGAGAAGTGAAAGTATTCGTGCCTTTTTTGATGGATATATAAACGCAACAACAACACTCCAACAGTTTCTAAGGCAATGTGACAATGCCCTCCAAGACAAGGCGGAAAAGGAATATGAGGCTGATGTTCGATCATTGAACTCAACAATTCCTTGTGGGTCAAACTCCATGATTGAGAGGCAATTCCAAGCTGAATACACTCACGCGAAATTTAATGAGGCTCAAGCTGAATTTAGAGCAAAAATGAATTGTTGTCTTAGTTGCAGGGGTATGGATGGTTCCAAATGTACATATGATGTGATGGAGGAGATGCTAGTTTCTGGGTGTCCAAAGGAAGCAAATTTCCATGTAGTATTCAATCGTGATAATCACGATGTTAAGTGCAGCTGTTTACTGTTTGAGTTTAAAGGCATAATGTGTAGACATTCACTTCTTGTCCTTGCTCAAGAAAGGGTGAAAGAAGTGCCATCAAAGTTTGTTTTGACCAGATGGAGCAAAAATGTACGTAGGAAACATGTTTACATCAAGACCAGTTACGATGTCAAGCAGATGCAGCCACAAATGCACAGATTTGATGATTTATGCAATGAGTTCTATAAAATTGCAGAGATTGCAGCTGAATCACCAGATGCCACTGATTGGCTATACCAATCAGTGCGTGCAATTAAGTACAAGCTGCACACAGTTGCTGCACTTCCGCACAGTCGTGGTGATGACCTGGTTGAAGGTGAAGTGAAAGGGTCAGAAAAATGTGTACCTGACAATAATAGTAAAGGATAG 2085 0.3966 MEQENVLDHGGPSNDVAASPKYSQLRDQTSMIIKDTVDSQPDYFEPVVGMSFHSAEAIKSFYRQYATRKGFRIMIRNSRKGADGKLKYFILACSREGNYVSMIPNDLKTYPTIKNKCPARITVALKDGLWYIMTVHTDHCHDFNPGKSMLFSGNKTMSMHVKRAIQINNEEGMRLNKSYRPLLYDVEGYENLSFVEQDVGNVVGRERRTLGKEGDGKALLAYFAQMQQHNRNFFYEVDLDDDFHVNNVFWADARSRATYEYFGDIVFFDTTYLANKYEMPFALFVGVNHHGQLILLGCGLLSAEDTESFAWLFQSWLRCMSGKAPEGIITDQCKAMQNAIELVFPNARHRWCLWHIMKKMPKKLIGLPEYKNIMNAMNIAVYDSLTVDEFESMWSSFIEKFGLGDNEWLNGLYKEQSKWVPCFIKQDFWAGMSTTQRSESIRAFFDGYINATTTLQQFLRQCDNALQDKAEKEYEADVRSLNSTIPCGSNSMIERQFQAEYTHAKFNEAQAEFRAKMNCCLSCRGMDGSKCTYDVMEEMLVSGCPKEANFHVVFNRDNHDVKCSCLLFEFKGIMCRHSLLVLAQERVKEVPSKFVLTRWSKNVRRKHVYIKTSYDVKQMQPQMHRFDDLCNEFYKIAEIAAESPDATDWLYQSVRAIKYKLHTVAALPHSRGDDLVEGEVKGSEKCVPDNNSKG. 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06031 694 MobiDBLite consensus disorder prediction 1 20 - -
Seca8g06031 694 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 662 IPR031052 GO:0006355
Seca8g06031 694 SMART 26again6 561 588 IPR006564 GO:0008270
Seca8g06031 694 Pfam FAR1 DNA-binding domain 60 144 IPR004330 -
Seca8g06031 694 ProSiteProfiles IQ motif profile. 53 80 IPR000048 GO:0005515
Seca8g06031 694 Pfam MULE transposase domain 265 359 IPR018289 -
Seca8g06031 694 Pfam SWIM zinc finger 562 582 IPR007527 GO:0008270
Seca8g06031 694 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06031 Seca-Chr8 153938134 153940218 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g06031 MULE 3.5e-35 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06031 - - gmx:102667848 836.254