Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06025 ATGGCCGGCTATTTTCCCTTTGAAGATAACAATCTTATGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCATGGTTTTCTTCAAAATCAAAGAAACTAATCAATAGAATCCTTGATCCCAATCCTGCAACACGGATTACAATTGCTGAGGTCATTGAGAATGAGTGGTTCAAGAAGGGGTATGTGCCTCCTAGATTTTCAGAGGCCAATGTTAGTCTTGATGATATAAATGCTATTTTCAGTGAAGTAGATGACTCACAAAATCTAATTGTGGAGAGGCGAGAAGAGAGACCTGTTGCACCACCTGTGACTATGAATGCCTTTGAGGTTATCTTTACATCTCAGGGCCTCAACCTTGGAAATCTTTTCGAGAAGCAATGTTTGGTCTCTTAG 405 0.3951 MAGYFPFEDNNLMALYKKIFKAEFTCPPWFSSKSKKLINRILDPNPATRITIAEVIENEWFKKGYVPPRFSEANVSLDDINAIFSEVDDSQNLIVERREERPVAPPVTMNAFEVIFTSQGLNLGNLFEKQCLVS. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06025 134 ProSiteProfiles NAF domain profile. 104 128 IPR018451 GO:0007165
Seca8g06025 134 SUPERFAMILY Protein kinase-like (PK-like) 2 69 IPR011009 -
Seca8g06025 134 ProSiteProfiles Protein kinase domain profile. 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g06025 134 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 129 - -
Seca8g06025 134 Gene3D Kinase associated domain 1, KA1 110 134 - -
Seca8g06025 134 Pfam NAF domain 106 130 IPR004041 GO:0007165
Seca8g06025 134 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06025 Seca-Chr8 153869519 153873417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06025 1 130 CBL-interacting serine-threonine protein kinases AT1G30270 75.385 1.80e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06025 - - twl:120014092 213.386