Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05984 ATGGTTGGTAGTAGTCAATCCATGACAGGTGAAAGCTCAGTGTTCAAGGAAGGTGACCATTCTATATTTTACTTGGAAGAGGATGAGGAAATCCCTATTCCAAGTGGTAATGGTTATTTCATTAACAATTTAGGTGCTTCTGTTTTTGTGGTGGATGAGGATTTCAATGATTCTGAAGGTCATGAGGAGGCCTTTAGCCCACATGAAATTGTCATGTATGATTTTGGTAGTATGGACCTAGCCTACAAATTCTATAATTCCTATGCGATGCGTAATGGGTTTTGTGCTAGGAAATCTTCAATGGTAAGAAGCAAAAAAACTCGTGAGCCATATCAGCAAGAGTATGTTTGTAATAGGGCAGGCGCTAGACGACCTAATGGTAGAAATTTTGAGGAATTGAAGCGTGAGCCTAGAGTTGATTTTCGTTGTGTGTGTTTAGAAAAATTTAGGGTTCATGTTGACATAGTGACATGTCGATGGTACTGTACATGGTTTGATGATGTTCACAATCATGACATGTTAAATGAAGTCCACTGTGCAATGCTCCCAGGACATAGAAGGATGTCTGATAGTGAAATCAATCAAATGAATGAAATGATGAAAGTTGGTATTGGTCCCCCACACATATATAGGTCTCTTGCTTACCAAGCTGGAGGATATGAGAAAATTGGTTTCAAGAAGAAGGGCTTATATAACCAGATTCATCGCCAAAGGCGTGAACAGAGTTGTGATGCAGTGTCAGCGTTAAAATTTTTGAAGCAAATGGGGTCCAAAGATGAGATGATGTATTTTGAACATACAGTTGATAGTGAGGGTAGACTCCAACACTTGTTTTGGAGTGACGGTATCTGTCAGCTGAATTATCAAATTTTTGGTGATGTGTTAGCTTTTGATGCTACATACGGCAAGAACAAATATCTATTGCCTTTAGTGGTATTTTCGGGTGTCAACAATCATAATCGTTCTACTCTTTTTGCTGGTGCTATAGTCTCAAATGAGACGGAAGAAACACATGTGTGGTTGTTGAACCAGTTTGTAAAAGCAATGAAAGGAAAGGTTCCTAGTGCAGTAATCACTGATGGTGACAATGCCATGAGAAATGCAATTAAAAGGGTATTTCCTAATGCCCATCATCGTTTATGTGCATGGCATCTGTTACGTAATGCTACTTCCAATGTAGGAATAAATGGTTTCACTGCATTGCTAAAGAAGTGTATGATGGGTGATTATGATGTAAGTGAGTTCGAGCAGAAGTGGGATCGATTGATTTCAAAGTTTAATTTGGAGGATAATCAATGGGTGTCTACACTTTATCAGAGAAGGTCAAAGTGGGCGACTGCTCATATCCGTGGAAATTTTTTTGCTGGGTTTAGAACTACTTCAAGATGTGAGAGTTTGCATGCAGAGTTAGCAAAGTTTGTGCACTTAAGTGGTCAATTCGGTTTAGAGAACTTGCGTGATCCTGTTCGGGTAAGGACTAAAGGTCGTGGTGGTGGAAATTCGAAAAGTAGTGGGCTATCATTTGCTAGGAGGAATAAATGCTCTATATGTAAGGTTCGAGGACACAATAGGGTCACTTGCCCCCAAAGATATAGAGAAGGACATGGGCAACAATTTAAGGGAGCATCAAGTCAACCAAGTGAAGATGATGACATATATTACCCCACACATGAATTAAATTCTGAGTTGGGTGATGAAGATTAA 1704 0.3944 MVGSSQSMTGESSVFKEGDHSIFYLEEDEEIPIPSGNGYFINNLGASVFVVDEDFNDSEGHEEAFSPHEIVMYDFGSMDLAYKFYNSYAMRNGFCARKSSMVRSKKTREPYQQEYVCNRAGARRPNGRNFEELKREPRVDFRCVCLEKFRVHVDIVTCRWYCTWFDDVHNHDMLNEVHCAMLPGHRRMSDSEINQMNEMMKVGIGPPHIYRSLAYQAGGYEKIGFKKKGLYNQIHRQRREQSCDAVSALKFLKQMGSKDEMMYFEHTVDSEGRLQHLFWSDGICQLNYQIFGDVLAFDATYGKNKYLLPLVVFSGVNNHNRSTLFAGAIVSNETEETHVWLLNQFVKAMKGKVPSAVITDGDNAMRNAIKRVFPNAHHRLCAWHLLRNATSNVGINGFTALLKKCMMGDYDVSEFEQKWDRLISKFNLEDNQWVSTLYQRRSKWATAHIRGNFFAGFRTTSRCESLHAELAKFVHLSGQFGLENLRDPVRVRTKGRGGGNSKSSGLSFARRNKCSICKVRGHNRVTCPQRYREGHGQQFKGASSQPSEDDDIYYPTHELNSELGDED. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05984 567 PANTHER OS01G0519700 PROTEIN 69 467 - -
Seca8g05984 567 MobiDBLite consensus disorder prediction 530 567 - -
Seca8g05984 567 Pfam MULE transposase domain 294 388 IPR018289 -
Seca8g05984 567 Pfam FAR1 DNA-binding domain 83 174 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05984 Seca-Chr8 153222847 153225644 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g05984 MULE 3.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05984 - - tpra:123913749 525.013