Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05962 ATGGGGAGGTCCCAAATGAATTTCAAGAGGCTTTCACTTACCGACATCAAGATTGATATCAAGAGGATCCCCAAGAAGAAAGATCTCATCAAAGCAATGGAAGCTGCAGATGTTAAGAACAAGTGGGAGAACAGCTCCTGGGGCAGAAAACTGATTGTTAGAAAGAGAAGGGCAGCCCTCAACGATTTTGATAGGTTCAAGTTAATGTTGACAAAGATCAAGAGGTCAGCTGTTGTTAGGCAAGAACTTGCTAAGCTGAAAAAGAGTGCATCTTAG 276 0.4239 MGRSQMNFKRLSLTDIKIDIKRIPKKKDLIKAMEAADVKNKWENSSWGRKLIVRKRRAALNDFDRFKLMLTKIKRSAVVRQELAKLKKSAS. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05962 91 Gene3D - 1 44 IPR014722 -
Seca8g05962 91 PANTHER 60S RIBOSOMAL PROTEIN L14 3 89 IPR039660 GO:0003723|GO:0003735
Seca8g05962 91 SUPERFAMILY Translation proteins SH3-like domain 3 51 IPR008991 -
Seca8g05962 91 Pfam Ribosomal protein L14 3 75 IPR002784 GO:0003735|GO:0005840|GO:0006412
Seca8g05962 91 Gene3D - 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05962 Seca-Chr8 152967118 152968418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05962 1 91 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 79.121 6.01e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05962 K02875 - gmx:100817659 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05962 8 152967118 152968418 Seca8g05962 8 152967118 152968418 ECH