Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05959 ATGGCTCCCACCCCTTCTTCCAAACCAAACCACTCCTCTCTATTGAAGACTCCACAGTCCAAACATCGCCTCAATTTCAATGGTCTCAAAGCAGCACAACCACCATCACATCCATCTCCAAATCCCAATCACAATCCCAATTCTGCTGCCAACAAAGAGGCCCCTCCTGAACACCCCATTGAAGTCATTGCCAGAATCCGTGACTACCCAGATCGAAAAGACAAGCCTCAATCGGTTCTTCAGACCAGTTCTAACTCAACGTCTATTCGTGTTCGTGCCGATTTCGGGTACAGGGACTTCACCCTTGATGGGGTTTCTGTGTCTGAGGAAGAGGACTTGGATGTCTTCTATAAGAAATTTGTGGAATCAAGGATCAATGGGGTTAAGCTGGGGGACAAGTGCACCATCATGATGTATGGGCCAACTGGTTCTGGCAAGAGTCACACCATGTTTGGGTGTTCAAAACAGGCAGGGATAGTGTATAGGTCGTTGAGGGACATTCTTGGAGATGGGGATGCAGATGCTGATGGAGATGGTGATTCAAAAGGACAGCATCTTGGGTTGGGAACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCCACCAATGGAGGAGGAGGTGGTGGATTTGGATTTGGGTGGCCTAAGGGCAGTGCTTCAAAGGTGAAACTTGAAGTTATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAAATCTCAAAAGAAATTCAGAAAGTGGAGAAACGAAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTGGGAGGTAGACTAATGCTTGTAGACATGGCAGGATCAGAAAACATTGAACAAGCTGGTCAAACTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCACTGAAGAGAGTGGTTGAGTCCATTGCAAATGGCGATTCACATGTGCCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCTGATCCTAAGGAGATACATAAGACAATCTCTACACTTGAATATGGAGCGAAAGCAAAATGTATAGTTCGTGGCCCTCATACCCCAGTCAAAGAAGAGGAATCTTCTTCTGCTGTTATTTTGGGGTCAAGAATTGCTGCAATGGATGAATTTATCATGAAGCTACAAATGGAAAACAAGCTAAGAGAGAAAGAGAAAAATGAAGCTCACAAAAAGCTTTTGAAGAAAGAGGAAGAAATTGCTGAACTAAGAGCTAAACTGGAAACTACAGAAGGAAAAGAAACTACTCCTGCAAGTGAGGAGGAGATTAACATGAAGGTAAATGAACGAACCCGGCTTCTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGCCAAAGAATAACTAATGAGTTTGTTGAATTGGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGACTGGAAGAAATTGAGTTGCAGCTATCTAGTTCAAGGAATGGGTGTACTGAGGACAATGAATCAAAAGACATGGAATCAAGTGGGTTTGTGAGAAGGCTATTGCGTGTTTACAAAAGTGAGGACGATCCTGGAATGGTAAAATCAATGGATTTGGACATGGATGATCAAGAACCCCTTGCACGTGAAGTAAATATTGTTGGTGGAGTTATGTGCAGGAGTGGTTACAATGTTATGCAAGACTTTTCAAATCAACCTTGTCCAAATACTTTGACTGGCACACAAGAAAATGCTTATGTTTGTGCACCAAACTTTGGTCAAAGAGTATGTCTTAGTACAGTGTATGAGGAAGAAGGAGAAGGAGAACAGGATCATGAAGATAAGGGGGAGGATGAGGAAGTGCAGAAAGAAGTCATAGAGGAAAAGAGAGTGGTATGTACTATTGACAAGCCTAGTGCTGCTGCCTCCTTGGCAACTTCAAACCTGCATAGAAGTCCAAAGAGAGAGGATTATTGTTCTAAGGGAAGTTCAGAGGATGACAAGGATATTGGGGCTTCTAGACTACTGAGAATTCAAAATATTTTTACTCTCTGTGGAAACCAAAGAGAGCTCTCCCAGCACATTGGAACCCCAATACCTACAAAGAAGAGGTCTGATGAAAATTGTGATCTCAAGTTTTCTCCTGTGAAGACAAGTGCCAAGAATTCTGTTTTTCAAATCTCCAACAAGGAGAACCTGGAACCACATAATGTTGTGGGAAATTAG 2346 0.4228 MAPTPSSKPNHSSLLKTPQSKHRLNFNGLKAAQPPSHPSPNPNHNPNSAANKEAPPEHPIEVIARIRDYPDRKDKPQSVLQTSSNSTSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDADADGDGDSKGQHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGFGFGWPKGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEESSSAVILGSRIAAMDEFIMKLQMENKLREKEKNEAHKKLLKKEEEIAELRAKLETTEGKETTPASEEEINMKVNERTRLLRQELEKKLEECQRITNEFVELERKRMEERILQQQEEVEILRKRLEEIELQLSSSRNGCTEDNESKDMESSGFVRRLLRVYKSEDDPGMVKSMDLDMDDQEPLAREVNIVGGVMCRSGYNVMQDFSNQPCPNTLTGTQENAYVCAPNFGQRVCLSTVYEEEGEGEQDHEDKGEDEEVQKEVIEEKRVVCTIDKPSAAASLATSNLHRSPKREDYCSKGSSEDDKDIGASRLLRIQNIFTLCGNQRELSQHIGTPIPTKKRSDENCDLKFSPVKTSAKNSVFQISNKENLEPHNVVGN. 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05959 781 Gene3D Kinesin motor domain 40 396 IPR036961 -
Seca8g05959 781 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 PRINTS Kinesin heavy chain signature 131 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 PRINTS Kinesin heavy chain signature 269 286 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 Coils Coil 475 542 - -
Seca8g05959 781 SMART kinesin_4 57 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 Coils Coil 428 464 - -
Seca8g05959 781 MobiDBLite consensus disorder prediction 1 26 - -
Seca8g05959 781 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 41 398 - -
Seca8g05959 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 400 IPR027417 -
Seca8g05959 781 MobiDBLite consensus disorder prediction 690 708 - -
Seca8g05959 781 MobiDBLite consensus disorder prediction 687 708 - -
Seca8g05959 781 ProSiteProfiles Kinesin motor domain profile. 59 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 Pfam Kinesin motor domain 81 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g05959 781 MobiDBLite consensus disorder prediction 1 57 - -
Seca8g05959 781 PANTHER KINESIN-RELATED 62 665 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05959 Seca-Chr8 152941970 152945722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05959 114 405 Calmodulin-binding Proteins AT5G65930 28.339 7.70e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05959 - K10398 gmx:100779567 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05959 8 152941970 152945722 Seca8g05959 8 152941970 152945722 ECH