Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05935 ATGACAAGTGATACTCTAGAGTTACAGGAACGACAAGCTTCTGTAATCTACTTAGAAGAGGATGAGGAAATCCCCATAGAACATGGTGACGCCTATTTCATTGATGAAGTAGGTGGTGGTGTATTCCTTGTTGATAATGATTGGGATGGTGAACAATCTGGAGAAGATGAACAATGGGATGAGCCTTGTACCGAAATTCCTGGTTTTGGGGATAGCGTCCCTAGATTTAGGATTGATAGTGAGGAGGATATTAAAGGGATGGACTTGAAGGCATTTAGTCCACATGAAATTGAAATGTATGGCTTTGGTAGCATGGAATTGGCCTACAAGTTCTATAGTTCTTGTGCAATGAGGAATGGGTTTTGTGTTAGGAAATCATCTATTGTGAGAAGCAAAAAAACAAGGGAGCCATATCAGCAAGAGTATGTTTGTAATAGAGCAGGCTTTAGACGGGATAATGGGAAAAGTGTTGAAGATATGAAACGTGAGCCTAGAGTTAATTTTAGATGTGGATGTTCGGCATTATTTCGTGTTCACATTGACTTTGTGACTTCCCGATGGTATTGTACTTGGTTTGATGATGATCACAACCATGATTTGTTGGATCCAATACACTGTGGGATGCTTCCAGCACATAGGAAGATGTCTGCTAGTGAAATAATGCAGATGAATGAAATGATGAAAGTTGGTATTAGTCCCCCTCACATTTATAGGTCATTTTCTTTGCAAGCAGGAGGTTATCAGAAATTTGGTTTTAGGAAGAAGGACTTGTATAACCAGATCCATCGTCAAAGGCGTGAGCAATGTTCAGATGTGGTGGAAGCTCTAAAATACTTGAAGGATATTGGAGGGAAGGATGGTAAGATGTACATTGAGCACACAATTGATAGTGAAGGGAGACTCCAACATTTGTTTTGGAGTGATGGTATTTGTTAG 936 0.3985 MTSDTLELQERQASVIYLEEDEEIPIEHGDAYFIDEVGGGVFLVDNDWDGEQSGEDEQWDEPCTEIPGFGDSVPRFRIDSEEDIKGMDLKAFSPHEIEMYGFGSMELAYKFYSSCAMRNGFCVRKSSIVRSKKTREPYQQEYVCNRAGFRRDNGKSVEDMKREPRVNFRCGCSALFRVHIDFVTSRWYCTWFDDDHNHDLLDPIHCGMLPAHRKMSASEIMQMNEMMKVGISPPHIYRSFSLQAGGYQKFGFRKKDLYNQIHRQRREQCSDVVEALKYLKDIGGKDGKMYIEHTIDSEGRLQHLFWSDGIC. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05935 311 PANTHER OS01G0519700 PROTEIN 101 309 - -
Seca8g05935 311 Pfam FAR1 DNA-binding domain 110 201 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05935 Seca-Chr8 152617515 152621813 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g05935 FAR1 1.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05935 - - tpra:123913749 253.062